CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
endoplasmic reticulum 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04444	Canola	mitochondrion	32.38	50.84
CDY02235	Canola	cytosol	33.1	50.27
CDY36723	Canola	cytosol	32.74	47.18
CDY16796	Canola	cytosol	38.08	44.96
CDY10445	Canola	cytosol	38.08	44.58
CDY15421	Canola	cytosol	38.08	44.58
CDY40361	Canola	cytosol	38.08	44.58
GSMUA_Achr2P16250_001	Banana	cytosol	37.72	43.27
CDY31804	Canola	cytosol	64.06	43.17
CDX89754	Canola	plastid	33.1	41.52
CDY53148	Canola	cytosol	37.37	41.02
CDY16175	Canola	cytosol	37.37	40.86
CDX85038	Canola	cytosol	37.37	39.92
KRH01639	Soybean	cytosol	89.68	38.95
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	27.05	36.36
OQU92817	Sorghum	cytosol	35.94	33.78
TraesCS6A01G342400.1	Wheat	cytosol	57.65	32.99
KRH21041	Soybean	cytosol	34.52	32.88
KRH30699	Soybean	cytosol	37.72	32.32
HORVU6Hr1G082550.1	Barley	cytosol	39.86	28.5
KRG98077	Soybean	cytosol	45.91	27.62
Zm00001d007706_P001	Maize	cytosol	32.03	26.55
KRH11209	Soybean	cytosol	27.76	24.15
KRH77864	Soybean	cytosol	36.3	17.86
KRH14415	Soybean	cytosol	30.61	11.13
KRH44373	Soybean	cytosol, endoplasmic reticulum, nucleus	31.32	10.33
KRH09848	Soybean	endoplasmic reticulum, nucleus	31.67	10.31
KRH21161	Soybean	cytosol	2.49	10.29
KRH23474	Soybean	endoplasmic reticulum	30.96	10.08
KRG98799	Soybean	cytosol	27.4	10.05
KRH47052	Soybean	cytosol, endoplasmic reticulum	30.61	10.04
KRH51336	Soybean	cytosol	19.57	9.98
KRH46160	Soybean	cytosol	27.05	9.88
KRH17619	Soybean	endoplasmic reticulum	27.76	8.75
KRG90078	Soybean	endoplasmic reticulum	27.05	8.51

Protein Annotations

Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EMBL:ACUP02000775
EnsemblPlantsGene:GLYMA_02G092800	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	UniProt:K7K7B4	EnsemblPlants:KRH70478	ProteinID:KRH70478
ProteinID:KRH70478.1	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF325
SUPFAM:SSF53067	UniParc:UPI000294F291	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:8244748..8245748

Molecular Weight (calculated)

30819.5 Da

IEP (calculated)

6.541

GRAVY (calculated)

-0.001

Length

281 amino acids

Sequence
(BLAST)

001: MIGGCYFADA KRLIGRRVSD PSVHSDMKLW PFKVIAGAGE KPMIGVNYKG KEKQFSTEEI SSMVLTKMRK IAEAYLGSTV KNAFVTVPAY FNDSQRQASK
101: DVGVITGLNV MRIINEPTVV AIALGLDKKA TSVGEKNVLI FDLGGGTFDT TIEIDSLFEG IDFYSTITRA RFEELNMNLF RKCMEPVEKC LREAKMSKIT
201: VHDVVLVGGS TRIPKVQQLL QDFFNGKDLC KNINPNEVAA YGVAVQATIL SGEGNEKVQD LLLLDFTPLS LGLETAGDVM T

Best Arabidopsis Sequence Match ( AT1G56410.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDM KFWPFKVTPG
101: QADKPMIFVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG SSIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGIKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GDARALRRLR TACERAKRTL SSTAQTTVEV DSLFEGIDFY
301: SPITRAKFEE MNMDLFRKCM EPVMKCLRDS KMDKSMVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGIE TIGGVMTTLI QRNTTIPAKK EQEFTTTVDN QPDVLIQVYE GERARTIDNN ILGQFVLSGI PPAPRGIPQF TVCFDIDSNG ILNVSAEDKA
501: TGKKNKITIT NDKGRLSKDD IEKMVQEAEK YKSEDEEHKK KVEAKNGLEN YAYNVGNTLR DMGEKLPAAD KKKFEDSIEE VIQWLDDNQL AEADEFEHKM
601: KELESVWSTI ITKMYQG

Arabidopsis Description

HSP70-18Heat shock 70 kDa protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.