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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH17619 Soybean endoplasmic reticulum 94.51 94.72
KRH51336 Soybean cytosol 51.06 82.76
HORVU2Hr1G036440.8 Barley cytosol 9.29 80.58
HORVU6Hr1G001950.1 Barley cytosol 16.35 72.64
VIT_04s0008g04410.t01 Wine grape endoplasmic reticulum 70.55 70.39
HORVU1Hr1G040940.1 Barley cytosol 9.52 68.55
VIT_09s0096g00090.t01 Wine grape endoplasmic reticulum, plastid 71.0 67.88
PGSC0003DMT400041135 Potato extracellular 66.97 67.19
CDX90500 Canola endoplasmic reticulum 64.95 66.74
CDY60712 Canola endoplasmic reticulum 64.95 66.74
Solyc07g043560.2.1 Tomato plastid 66.52 66.74
Bra012696.1-P Field mustard endoplasmic reticulum 64.84 66.63
AT4G16660.2 Thale cress endoplasmic reticulum, mitochondrion 65.96 66.11
CDY32270 Canola cytosol, mitochondrion, plastid 58.23 65.99
CDY40516 Canola cytosol 60.92 65.15
HORVU1Hr1G077070.2 Barley cytosol 17.47 64.73
Bra038496.1-P Field mustard endoplasmic reticulum 60.69 64.07
GSMUA_Achr6P09420_001 Banana endoplasmic reticulum 63.38 63.38
GSMUA_Achr10P... Banana endoplasmic reticulum 63.49 63.28
TraesCS6D01G257000.1 Wheat endoplasmic reticulum 61.25 62.09
TraesCS6B01G304200.1 Wheat golgi 61.59 62.08
TraesCS6A01G276700.1 Wheat endoplasmic reticulum, unclear 61.37 61.85
Zm00001d051607_P004 Maize endoplasmic reticulum 62.15 61.74
VIT_04s0043g00710.t01 Wine grape cytosol 49.83 60.14
TraesCS1B01G206700.1 Wheat cytosol 16.46 59.27
Zm00001d017809_P002 Maize plasma membrane 60.25 58.04
KXG30896 Sorghum endoplasmic reticulum 59.35 57.11
Zm00001d051609_P004 Maize cytosol 28.56 54.6
KRH70478 Soybean cytosol 8.51 27.05
KRG98799 Soybean cytosol 22.73 26.5
KRH21161 Soybean cytosol 2.02 26.47
KRH14415 Soybean cytosol 22.84 26.39
KRH46160 Soybean cytosol 22.4 26.01
KRH01639 Soybean cytosol 18.59 25.66
KRH44373 Soybean cytosol, endoplasmic reticulum, nucleus 23.96 25.12
KRH47052 Soybean cytosol, endoplasmic reticulum 23.63 24.62
KRH09848 Soybean endoplasmic reticulum, nucleus 23.74 24.57
KRH23474 Soybean endoplasmic reticulum 23.63 24.45
KRG98077 Soybean cytosol 12.09 23.13
KRH30699 Soybean cytosol 8.29 22.56
KRH21041 Soybean cytosol 7.39 22.37
KRH11209 Soybean cytosol 7.5 20.74
KRH77864 Soybean cytosol 11.76 18.39
Protein Annotations
Gene3D:1.20.1270.10EntrezGene:100788296MapMan:19.1.1.2.5Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10
UniProt:A0A0R0EJN3EMBL:ACUP02012541EnsemblPlantsGene:GLYMA_20G065900GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005524InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Heat_shock_70_CSInterPro:Hsp_70_famInterPro:IPR029047
InterPro:IPR029048EnsemblPlants:KRG90078ProteinID:KRG90078ProteinID:KRG90078.1PFAM:PF00012PRINTS:PR00301
ScanProsite:PS01036PANTHER:PTHR19375PANTHER:PTHR19375:SF320SUPFAM:SSF100934SUPFAM:SSF53067SignalP:SignalP-noTM
UniParc:UPI000233D93BSEG:seg::::
Description
hypothetical protein
Coordinates
chr20:-:23299922..23309291
Molecular Weight (calculated)
98985.9 Da
IEP (calculated)
5.418
GRAVY (calculated)
-0.452
Length
893 amino acids
Sequence
(BLAST)
001: MASLKVALLA LFSVALMFSP SQSAVFSVDL GSESVKVAVV NLKPGQSPIC IAINEMSKRK SPALVSFHDG DRLLGEEAAG LAARYPQKVY SQMRDLIAKP
101: YASGQRILNS MYLPFQTKED SRGGVSFQSE NDDAVYSPEE LVAMVLGYAA NLAEFHAKIP IKDAVIAVPP HMGQAERRGL LAAAQLAGIN VLSLINEHSG
201: AALQYGIDKD FSNESRHVIF YDMGASSSYA ALVYFSAYKG KEYGKSVSVN QFQVKDVRWN PELGGQHMEL RLVEYFADQF NAHVGGGIDV RKFPKAMAKL
301: KKQVKRTKEI LSANTAAPIS VESLLDDVDF RSTITREKFE ELCEDIWEKS LLPVKEVLEH SGLSLEQIYA VELIGGATRV PKLQAKLQEF LGRKELDRHL
401: DADEAIVLGA ALHAANLSDG IKLNRKLGMV DGSLYGFVVE LNGPDLLKDE SSRQILVPRM KKVPSKMFRS VNHNKDFEVS LAYESDNYLP PGVTSPEIAQ
501: YQISGLTDAS QKYSSRNLSS PIKANIHFSL SRSGILSLDR ADAVIEITEW VEVPRKNLTI ENSTISSNVS AESAAGNSTE ENNESVQTDS GVNKASNISA
601: EEQAATEPAT EKKLKRQTFR VPLKIVEKIT GFGMSLSQDF LAEAKRKLQV LDQKDADRKR TAELKNNLEG YIYTTKEKIE TLEEFEKVST SEERQSFIEK
701: LDQVQDWLYT DGEDANATEF QEHLDQLKAV GDPIFFRLKE LTTRPAAVEH AHKYIDELKQ IVQEWKAKKP WLPQERVDEV IKSSEKLKNW LDEKEAEQKK
801: TSGFSKPAFT SEEVYLKVLD LQTKVASINR IPKPKPKVQK PVKNETESSS AQNTETSDSN SADSSSSSDS SANSSEGTSK ETVTEQSEGH DEL
Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)
001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL
Arabidopsis Description
heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.