Factsheet for VIT_09s0096g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

nucleus 1
plastid 3
endoplasmic reticulum 3
mitochondrion 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g04410.t01	Wine grape	endoplasmic reticulum	90.58	94.53
HORVU2Hr1G036440.8	Barley	cytosol	8.78	79.61
VIT_04s0043g00710.t01	Wine grape	cytosol	63.06	79.59
HORVU6Hr1G001950.1	Barley	cytosol	15.85	73.63
KRH17619	Soybean	endoplasmic reticulum	68.74	72.05
HORVU1Hr1G040940.1	Barley	cytosol	9.53	71.77
CDX90500	Canola	endoplasmic reticulum	66.17	71.12
CDY60712	Canola	endoplasmic reticulum	66.17	71.12
CDY32270	Canola	cytosol, mitochondrion, plastid	59.96	71.07
Bra012696.1-P	Field mustard	endoplasmic reticulum	66.06	71.0
KRG90078	Soybean	endoplasmic reticulum	67.88	71.0
PGSC0003DMT400041135	Potato	extracellular	67.45	70.79
AT4G16660.2	Thale cress	endoplasmic reticulum, mitochondrion	67.45	70.71
Solyc07g043560.2.1	Tomato	plastid	67.02	70.34
CDY40516	Canola	cytosol	62.85	70.3
KRH51336	Soybean	cytosol	41.22	69.87
Bra038496.1-P	Field mustard	endoplasmic reticulum	63.17	69.74
GSMUA_Achr6P09420_001	Banana	endoplasmic reticulum	66.27	69.32
GSMUA_Achr10P...	Banana	endoplasmic reticulum	66.17	68.97
HORVU1Hr1G077070.2	Barley	cytosol	17.02	65.98
TraesCS6A01G276700.1	Wheat	endoplasmic reticulum, unclear	62.21	65.58
TraesCS6D01G257000.1	Wheat	endoplasmic reticulum	61.78	65.49
TraesCS6B01G304200.1	Wheat	golgi	62.1	65.46
Zm00001d051607_P004	Maize	endoplasmic reticulum	62.63	65.07
TraesCS1B01G206700.1	Wheat	cytosol	16.17	60.89
Zm00001d017809_P002	Maize	plasma membrane	59.21	59.65
KXG30896	Sorghum	endoplasmic reticulum	58.67	59.05
Zm00001d051609_P004	Maize	cytosol	28.05	56.1
VIT_09s0002g04680.t01	Wine grape	cytosol	23.34	25.71
VIT_19s0090g00340.t01	Wine grape	cytosol	20.56	24.9
VIT_07s0005g06650.t01	Wine grape	cytosol	3.0	23.33
VIT_05s0020g03330.t01	Wine grape	cytosol	10.6	17.1

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100259994	wikigene:100259994	MapMan:19.1.1.2.5	Gene3D:2.60.34.10	Gene3D:3.30.420.40
Gene3D:3.90.640.10	ProteinID:CCB57545	ProteinID:CCB57545.1	ncoils:Coil	UniProt:F6HS86	EMBL:FN596243
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100259994	wikigene:LOC100259994
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF320	SUPFAM:SSF100934
SUPFAM:SSF53067	TIGR:TC54277	TIGR:TC65133	UniParc:UPI00021093A0	ArrayExpress:VIT_09s0096g00090	EnsemblPlantsGene:VIT_09s0096g00090
EnsemblPlants:VIT_09s0096g00090.t01	unigene:Vvi.3248	RefSeq:XP_002272000	RefSeq:XP_002272000.2	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:11486035..11502175

Molecular Weight (calculated)

103485.0 Da

IEP (calculated)

4.956

GRAVY (calculated)

-0.424

Length

934 amino acids

Sequence
(BLAST)

001: MIAHCSFVAQ VRIHSYSAPL ALAPTSMCSP PVNLLCVPSW LLGIFLSLLL LIPTPSQSAV SSIDLGSEWI KVAVVNLKPG QSPISVAINE MSKRKSPALV
101: AFQSGNRLIG EEAAGIVARY PDKVYSFIRD MIGKPYNKIQ DFLGKMYLPY NIVEDSRGTA TIRFDDGTVF SLEELEAMTL SYAIKLAEFH SKVPVKDAVI
201: AVPPYFGQAE RRGLLTAAQL AGVNVLALIN EHSGAALQYG IDKDFSNGSR HVVFYDMGSS STYAALVYFS AYNAKEYGKT VSVNQFQVKD VSWDPELGGQ
301: NMEMRLVEYF ADEFNKQVGN GVDVRKFPKA MAKLKKQVKR TKEILSANTA APISVESLYD DRDFRSAITR EKFEELCEDL WERSLIPVKE VLKNSGLKVD
401: EIYAVELIGG ATRVPKLQAK LQEFLGRKDL DRHLDADEAI VLGAALHAAN LSDGIKLNRK LGMVDGSSYG LVVELDGPGL LKDESTRQLI VPRMKKLPSK
501: MFRSIIHDKD FDVSLSYEDE DLLPPGVSSP RFAQYAVSGL ADASAKYSSR NLSSPIKANL HFSLSRSGIL SLDRADAVIE ITEWIEVPKV NVTLENSSAA
601: SPNISVETSP RNASEDSNEN LHADGGIDNT SNATENQSDK DLGTEKKLKK RTFRVPLKVV EKTVGPGMPL SKELIAEAKR KLEALDKKDA ERRRTAELKN
701: NLEGYIYTTK EKLESSEELE KISTTQERQS FIEKLDEVQE WLYTDGEDAT AAEFQERLDL LKSIGDPIFF RLNELTARPA AMEDAHKYLG QLKQIVQDWE
801: TKKPWLLKDK IDEVLSDGDK VKNWLEEKEA EQKKTSGFST PAFTSDEVYE KIFKFQEKVA SINRIPKPKP KIEKPTKNET TDNGASGEEK ANASDSSSEE
901: TPSSQDDQSA AGDSDGKPNE EAEAEAEAEV HDEL

Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)

001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL

Arabidopsis Description

heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.