Factsheet for GSMUA_Achr6P09420_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G036440.8	Barley	cytosol	9.63	83.5
GSMUA_Achr10P...	Banana	endoplasmic reticulum	83.76	83.48
HORVU6Hr1G001950.1	Barley	cytosol	16.57	73.63
HORVU1Hr1G040940.1	Barley	cytosol	9.74	70.16
HORVU1Hr1G077070.2	Barley	cytosol	18.81	69.71
VIT_04s0008g04410.t01	Wine grape	endoplasmic reticulum	69.2	69.05
TraesCS6B01G304200.1	Wheat	golgi	66.74	67.27
TraesCS6D01G257000.1	Wheat	endoplasmic reticulum	66.18	67.08
TraesCS6A01G276700.1	Wheat	endoplasmic reticulum, unclear	66.29	66.82
Bra012696.1-P	Field mustard	endoplasmic reticulum	64.84	66.63
CDX90500	Canola	endoplasmic reticulum	64.73	66.51
CDY32270	Canola	cytosol, mitochondrion, plastid	58.68	66.5
VIT_09s0096g00090.t01	Wine grape	endoplasmic reticulum, plastid	69.32	66.27
CDY40516	Canola	cytosol	61.93	66.23
CDY60712	Canola	endoplasmic reticulum	64.28	66.05
Zm00001d051607_P004	Maize	endoplasmic reticulum	66.07	65.63
PGSC0003DMT400041135	Potato	extracellular	65.06	65.28
AT4G16660.2	Thale cress	endoplasmic reticulum, mitochondrion	64.84	64.98
Solyc07g043560.2.1	Tomato	plastid	64.73	64.94
Bra038496.1-P	Field mustard	endoplasmic reticulum	61.37	64.78
KRH17619	Soybean	endoplasmic reticulum	64.05	64.2
KRH51336	Soybean	cytosol	39.42	63.88
KRG90078	Soybean	endoplasmic reticulum	63.38	63.38
TraesCS1B01G206700.1	Wheat	cytosol	17.02	61.29
Zm00001d017809_P002	Maize	plasma membrane	63.61	61.27
KXG30896	Sorghum	endoplasmic reticulum	62.93	60.56
Zm00001d051609_P004	Maize	cytosol	31.58	60.39
VIT_04s0043g00710.t01	Wine grape	cytosol	48.04	57.97
GSMUA_Achr8P34360_001	Banana	mitochondrion	16.8	28.79
GSMUA_Achr2P16250_001	Banana	cytosol	7.84	28.57
GSMUA_Achr6P34210_001	Banana	cytosol	6.72	28.17
GSMUA_Achr8P20840_001	Banana	cytosol	6.72	26.79
GSMUA_Achr10P...	Banana	cytosol	5.26	26.11
GSMUA_Achr10P...	Banana	cytosol	22.4	25.61
GSMUA_Achr2P15830_001	Banana	cytosol	23.85	25.15
GSMUA_Achr5P06230_001	Banana	cytosol	23.18	24.32
GSMUA_Achr2P19660_001	Banana	cytosol	22.96	24.15
GSMUA_Achr7P09800_001	Banana	cytosol	22.73	23.83
GSMUA_Achr9P19260_001	Banana	cytosol	11.42	17.35
GSMUA_Achr7P05820_001	Banana	cytosol	7.73	16.83

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.5	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr6G09420_001
EnsemblPlants:GSMUA_Achr6P09420_001	EnsemblPlants:GSMUA_Achr6T09420_001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	UniProt:M0T5J1	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF320	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	UniParc:UPI000295BD5F
SEG:seg	:	:	:	:	:

Description

Putative Hypoxia up-regulated protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G09420_001]

Coordinates

chr6:+:6337821..6347348

Molecular Weight (calculated)

99243.9 Da

IEP (calculated)

5.674

GRAVY (calculated)

-0.390

Length

893 amino acids

Sequence
(BLAST)

001: MMRSAAGIRL RLALFLIFSS FSIPSESAVS SIDLGSEWMK VAVVNLKPGQ SPISIAINEM SKRKSPALVA FHGGNRFVGE EAAGIVARYP DKVYSLVRDM
101: IGKSYKHAKD LANSLYLPYD LIEDTRGAAG IRVDDGVTVY TAEELLAMIL SYGMSLAKSH ARVPVKDAVI AVPPYFGQAE RRGVLQAAHL AGINVLSLIN
201: EHAGAALQYG LDKDFSNESR HVILYDMGSS STYAALVYFS AYNTKEIGKT KSVNQFLVKD VRWDAKLGGQ DMEMRLVEYF ADEFNKQLGN GIDVRKSPKA
301: MAKLKKQVKR TKEILSANTV APVSVESLFE DLDFRSTISR EKFEELCADL WERVLVPVKE VLRHSSLKID EIYAVELIGG ATRVPKLQAK LQEFLGRNYL
401: DKHLDADEAI VLGSSLHAAN LSDGIKLNRK LGMIDGSSYG FLLELDGPDL LKDENTNMLL IPRMKKMPIK LFRSIKHNKD FEASLSYDKV NELPPGVSTY
501: IFAQYSVLGL TEASEKYVAR NLSAPIKANL HFSLSRSGVL SLDRAEAVIE ISEWVEVPKK NTTLENNATN SFNVSTETSP GNSSQDNAEN LNSADSTNGS
601: SNSTKGEQAS DIITEKVLKK KTFRVPLKVL EKTTGPGSVL SEESISEAKI KLEALDKKDA ERRITAELKN SLEEYIYSTR EKIEDNNEVE KISSEEERYS
701: FVEKLTEVQE WLYTDGEDAS SGEFKERLEL LKAIGDPIFF RLNELTARPL ACEHAQLYLG ELQKIVNNWE TNKPWLPKTR IEEVLSEAEK LKNWLVEVEE
801: LQKKASLLST PIFTSDEVYQ KVSKLQDKVA SVNRIPKPKP KPEKPPKEEP ANHDNSTSTS NSTSGEQTSE TGHATQDSSS TTADQENVVH AEL

Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)

001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL

Arabidopsis Description

heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.