Factsheet for GSMUA_Achr10P09990_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g00340.t01	Wine grape	cytosol	63.0	63.81
Solyc02g080470.2.1	Tomato	cytosol	61.08	63.35
Os06t0679800-00	Rice	plasma membrane	43.02	63.28
KRH14415	Soybean	cytosol	59.41	60.03
TraesCS7B01G359100.1	Wheat	cytosol	56.21	59.97
KRG98799	Soybean	cytosol	58.77	59.92
Zm00001d036571_P002	Maize	cytosol	57.36	59.5
TraesCS7D01G445600.1	Wheat	cytosol	55.57	59.29
TraesCS7A01G457100.1	Wheat	cytosol	55.83	59.16
Zm00001d014358_P014	Maize	cytosol	56.47	58.72
KRH46160	Soybean	cytosol	57.62	58.52
CDY49794	Canola	cytosol	56.47	57.95
AT1G11660.3	Thale cress	cytosol	56.59	57.93
OQU76890	Sorghum	cytosol	58.0	57.78
HORVU7Hr1G105330.1	Barley	cytosol	56.08	57.56
Bra019840.1-P	Field mustard	cytosol	55.95	57.42
CDX97975	Canola	cytosol	55.83	57.29
GSMUA_Achr2P15830_001	Banana	cytosol	51.22	47.23
GSMUA_Achr7P09800_001	Banana	cytosol	51.47	47.18
GSMUA_Achr2P19660_001	Banana	cytosol	49.17	45.23
GSMUA_Achr5P06230_001	Banana	cytosol	49.17	45.12
GSMUA_Achr10P...	Banana	cytosol	8.58	37.22
GSMUA_Achr8P20840_001	Banana	cytosol	9.86	34.38
GSMUA_Achr6P34210_001	Banana	cytosol	8.71	31.92
GSMUA_Achr2P16250_001	Banana	cytosol	9.73	31.02
GSMUA_Achr8P34360_001	Banana	mitochondrion	17.8	26.68
GSMUA_Achr10P...	Banana	endoplasmic reticulum	25.99	22.66
GSMUA_Achr6P09420_001	Banana	endoplasmic reticulum	25.61	22.4
GSMUA_Achr9P19260_001	Banana	cytosol	14.72	19.56
GSMUA_Achr7P05820_001	Banana	cytosol	8.96	17.07

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
EnsemblPlantsGene:GSMUA_Achr10G09990_001	EnsemblPlants:GSMUA_Achr10P09990_001	EnsemblPlants:GSMUA_Achr10T09990_001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	UniProt:M0RGX5	PFAM:PF00012	PRINTS:PR00301	PANTHER:PTHR19375
PANTHER:PTHR19375:SF230	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI000296C389	SEG:seg

Description

Putative Heat shock 70 kDa protein 4L [Source:GMGC_GENE;Acc:GSMUA_Achr10G09990_001]

Coordinates

chr10:-:19650795..19659441

Molecular Weight (calculated)

88432.5 Da

IEP (calculated)

5.381

GRAVY (calculated)

-0.474

Length

781 amino acids

Sequence
(BLAST)

001: MSVVGFDVGN DSCVVAAVRQ RGIDVLLNDE SQRENPAVVS FGEKQRFLGA AGAASAARFP RSTVSQVKRL LGRPFRDPAV QDDLRRLPFP TSEAPDGGIL
101: IRIRFLNEER VFTPVQILAM LLAHLKLIAE KSLETLVSDC VIGIPSYLTD LQRRAYLDAA TIAGLKPLRL MHDCTATALG YGIYKTDSSA RGSSFCVVFI
201: DIGHCNTQVS VVSFGSERMN VLSHAFDANL GGRDFDEILF NHFTEKFKEE YQIDVHSNVR ASIRLRVACE KLKRVLSANA EAPLNIECLM DEKDVKGFIK
301: REEFERLCLG LLDRLLEPCK QALENAELNQ DRINAVELVG SGSRIPAITR ILTEFFRREP SRTLNASECV ARGCALHCAM LSPIFRVRDY EVQDSFPFSV
401: TFATDEGPIT TVSRNVLFPK SQLIPSVKML SFYRTDAFKM EAFYANQSEL PPGASQKISC FQVGPFPVHE GERYKVKVKV RLNLHGMVSV ESVSLIEDDD
501: NSTVSRDASR VDNMETEPAS DANSDSTVHT AENGIYEHVE HGSIPSSDTS KAERLPRRHE LLITETIYGG TTKEWLLEAQ EQEKWLAYQD KQMEQTKDKK
601: NALEAYVYEI RNKLFERYRS FANDSEREGI SVSLQQTEEW LYEDGDDETE KVYTGKLDEL KKLVDPIENR YKDEEARAQA TRELLKCIVD YRMAVSSLTT
701: YERDVVIDEC NKAEQWLRER SQQQDSLPKN TDPVLWSHEI KKRTEALDMS CRNHLRHKGS QSRSEDSRGS DHSNYENSRT D

Best Arabidopsis Sequence Match ( AT1G11660.4 )
(BLAST)

001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ
101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI
201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK
301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI
401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK
501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY
601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH
701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD

Arabidopsis Description

HSP70-16Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.