CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036571_P002	Maize	cytosol	89.67	93.36
Zm00001d014358_P014	Maize	cytosol	88.14	92.01
TraesCS7D01G445600.1	Wheat	cytosol	77.17	82.65
Os06t0679800-00	Rice	plasma membrane	55.61	82.11
TraesCS7A01G457100.1	Wheat	cytosol	77.17	82.09
TraesCS7B01G359100.1	Wheat	cytosol	76.53	81.97
HORVU7Hr1G105330.1	Barley	cytosol	76.91	79.24
GSMUA_Achr10P...	Banana	cytosol	57.78	58.0
Solyc02g080470.2.1	Tomato	cytosol	54.21	56.44
KRG98799	Soybean	cytosol	52.3	53.52
AT1G11660.3	Thale cress	cytosol	51.53	52.95
VIT_19s0090g00340.t01	Wine grape	cytosol	51.91	52.79
KRH46160	Soybean	cytosol	51.66	52.67
Bra019840.1-P	Field mustard	cytosol	50.89	52.43
CDX97975	Canola	cytosol	50.77	52.3
CDY49794	Canola	cytosol	50.64	52.17
KRH14415	Soybean	cytosol	50.51	51.23
EES17815	Sorghum	cytosol	45.79	42.64
EES19148	Sorghum	cytosol	45.66	42.07
OQU92817	Sorghum	cytosol	10.71	28.09
EER97842	Sorghum	endoplasmic reticulum, golgi	14.03	25.29
KXG30896	Sorghum	endoplasmic reticulum	25.26	21.34
EES16657	Sorghum	endoplasmic reticulum, golgi	11.61	20.78
EES18790	Sorghum	endoplasmic reticulum, extracellular, golgi	10.08	17.79
EER92633	Sorghum	plastid	13.27	16.28

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	UniProt:A0A1W0VUE5	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EnsemblPlants:OQU76890
ProteinID:OQU76890	ProteinID:OQU76890.1	PFAM:PF00012	PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF230
EnsemblPlantsGene:SORBI_3010G230600	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI0009DC870C	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:57307086..57313310

Molecular Weight (calculated)

86578.4 Da

IEP (calculated)

5.782

GRAVY (calculated)

-0.349

Length

784 amino acids

Sequence
(BLAST)

001: MSVVGFDVGN DTLVAAAARQ RGIDVLLNAE SKRESPAAVA FSHNARLIGC HAASASSAHA PFSSVKRLLV GATGRHPDAS LHRDLPRLPF PVSTGDGGAV
101: VHADHVGRRI ALSPTHLLSM LLAYLKQLAE SDLGGVPVAD CVISVPCYFT QAQRRAYLDA AAVAGLRPLR LMHDLAATAL GYGLYRSDLG GAGGPTCVAF
201: VDVGQCDTQV AVVSFDASGM KVLSHGFDAD LGGRDFDEVL FEHFAQEFRD RYRIDVVGNV KASMRLRAAC EKAKKVLSAN AEAVVNIECL MEEKDVRGVI
301: RREDFEKLCA RLLERVVEPC KRAVADSGVG LERLHSVELV GSGSRVPAIA KVLAGFFRRE PSRTLNASEC VARGCALQCA MLSPTFRVRE YEVQDAIPAS
401: IGFYTSDGPV STLSSDVLFR RGLPFPSVKI ITLHKNCSFS SDAYYADANE LPPGTSTDIG TFQIGPFQAH TEASKVKVKI RLNLHGLISV ESAALIDDYQ
501: RNANSADNME VDTSGDDTGH KSRSERSIQR QELPITEYIY GAMSKQELLE AQEQEQQLAY QDKLMERTKD RKNALESYVY DTRNKLSERY RSFATDSERE
601: QISVNLQQTE EWLYEEGDDE TEAVYSSKLE ELKKLLVFRG QEWSCSDSRW PWVAVDIRMG RVGPGVTLVD PIENRCKDDE VRAEATRDLL KCIVDHRMAA
701: RSLSTPERDA VDNECNKAEQ WLREGSQLQE TLPKNVDPVL WSCEIKRKEE ELDMFCRNIA RYKGSPARTD GSRGSDHMPT PDRD

Best Arabidopsis Sequence Match ( AT1G11660.4 )
(BLAST)

001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ
101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI
201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK
301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI
401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK
501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY
601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH
701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD

Arabidopsis Description

HSP70-16Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.