Factsheet for Bra019840.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97975	Canola	cytosol	99.87	99.87
AT1G11660.3	Thale cress	cytosol	90.01	89.78
Solyc02g080470.2.1	Tomato	cytosol	62.81	63.48
VIT_19s0090g00340.t01	Wine grape	cytosol	61.76	60.96
KRG98799	Soybean	cytosol	59.4	59.01
KRH46160	Soybean	cytosol	59.4	58.78
KRH14415	Soybean	cytosol	58.34	57.44
GSMUA_Achr10P...	Banana	cytosol	57.42	55.95
Os06t0679800-00	Rice	plasma membrane	36.79	52.73
Zm00001d036571_P002	Maize	cytosol	51.77	52.32
TraesCS7B01G359100.1	Wheat	cytosol	50.33	52.32
TraesCS7D01G445600.1	Wheat	cytosol	50.33	52.32
TraesCS7A01G457100.1	Wheat	cytosol	50.46	52.1
Zm00001d014358_P014	Maize	cytosol	50.99	51.66
OQU76890	Sorghum	cytosol	52.43	50.89
HORVU7Hr1G105330.1	Barley	cytosol	49.93	49.93
Bra014713.1-P	Field mustard	cytosol	50.33	47.05
Bra039679.1-P	Field mustard	cytosol	50.46	46.94
Bra012696.1-P	Field mustard	endoplasmic reticulum	26.15	22.9
Bra038496.1-P	Field mustard	endoplasmic reticulum	23.78	21.39
Bra005610.1-P	Field mustard	cytosol	14.72	19.86

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	EnsemblPlantsGene:Bra019840	EnsemblPlants:Bra019840.1	EnsemblPlants:Bra019840.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	UniProt:M4DTJ7	PFAM:PF00012	PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF324
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI000253EB89	SEG:seg	:

Description

AT1G11660 (E=0.0) | heat shock protein, putative

Coordinates

chrA06:+:4058424..4061750

Molecular Weight (calculated)

84552.0 Da

IEP (calculated)

5.903

GRAVY (calculated)

-0.493

Length

761 amino acids

Sequence
(BLAST)

001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPGMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFKEPDV QKDLKLFPFE TSEDSADGGI
101: QIQLRYMGEV QSFSPVQILG MLLSHLKQVA EKSLKTPVSD CVIGIPSYFT NSQRLAYLDA AAIAGLRPLR LMHDCTATAL GYGIYKTDLA ANSSPTCIVF
201: VDIGHCDTQV CVASFGSGSM RVLSHGSDRN LGGRDFDEVL FNYFAVEFKE KYSIDVYTNT KACVRLRASC EKVKKVLSAN AEAPLNIECL MEEKDVKSFI
301: KREEFEKLSS GLLERLIVPC QKALADSGLS LDQIHSVELV GSGSRIPAIS KMLSSLFKRE LGRTVNASEC VARGCALQCA MLSPIFRVRD YEVQDSFPFS
401: IGFSSDKGPI NTPSNEMLFP KGQVFPSVKV LTLRRENTFH LKAFYEDHNE ISPDSPSQIG TFTIGPFQSS HGEAARVKVR VQLNLHGIVT IDSASLIEDP
501: KENTTSEETV SENNHQSPAT KDGTSDPSSG STGNDHKAIK RMKISVVENV SGALTKDELL EAKQREYSLV QQDLKMESTK DKKNALESFV YEMRDKMLNT
601: YRSTATESER ECIARNLQET EEWLYEDGDD ESENAYIEKL NDIKKLIDPI ENRFKDGEER VQASKDLAKT IADNRMAAES LPPPRKNAVL DECKKVERWL
701: HERTTEQESH NHPELQSGEI RRKADALNAT CKYIGKSNSP PNKSEHNGSH GRRNSDDMEL D

Best Arabidopsis Sequence Match ( AT1G11660.4 )
(BLAST)

001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ
101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI
201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK
301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI
401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK
501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY
601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH
701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD

Arabidopsis Description

HSP70-16Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.