Factsheet for VIT_19s0090g00340.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98799	Soybean	cytosol	70.04	70.5
KRH46160	Soybean	cytosol	69.91	70.09
KRH14415	Soybean	cytosol	69.13	68.95
Solyc02g080470.2.1	Tomato	cytosol	65.5	67.07
GSMUA_Achr10P...	Banana	cytosol	63.81	63.0
CDY49794	Canola	cytosol	61.09	61.89
Bra019840.1-P	Field mustard	cytosol	60.96	61.76
CDX97975	Canola	cytosol	60.96	61.76
AT1G11660.3	Thale cress	cytosol	60.05	60.68
Os06t0679800-00	Rice	plasma membrane	40.34	58.57
TraesCS7A01G457100.1	Wheat	cytosol	53.05	55.5
TraesCS7B01G359100.1	Wheat	cytosol	52.53	55.33
TraesCS7D01G445600.1	Wheat	cytosol	52.4	55.19
Zm00001d036571_P002	Maize	cytosol	52.53	53.78
Zm00001d014358_P014	Maize	cytosol	51.75	53.13
HORVU7Hr1G105330.1	Barley	cytosol	52.4	53.09
OQU76890	Sorghum	cytosol	52.79	51.91
VIT_09s0002g04680.t01	Wine grape	cytosol	52.53	47.76
VIT_07s0005g06650.t01	Wine grape	cytosol	4.15	26.67
VIT_04s0008g04410.t01	Wine grape	endoplasmic reticulum	24.64	21.23
VIT_09s0096g00090.t01	Wine grape	endoplasmic reticulum, plastid	24.9	20.56
VIT_05s0020g03330.t01	Wine grape	cytosol	15.18	20.21
VIT_04s0043g00710.t01	Wine grape	cytosol	15.18	15.81

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100250433	wikigene:100250433	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10
Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	ProteinID:CCB50656	ProteinID:CCB50656.1	ncoils:Coil
UniProt:F6HEJ7	EMBL:FN595751	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100250433
wikigene:LOC100250433	PFAM:PF00012	PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF230	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	TIGR:TC67244	UniParc:UPI00015C7A69	ArrayExpress:VIT_19s0090g00340	EnsemblPlantsGene:VIT_19s0090g00340
EnsemblPlants:VIT_19s0090g00340.t01	unigene:Vvi.5551	RefSeq:XP_002278262	RefSeq:XP_002278262.1	RefSeq:XP_019072923.1	SEG:seg

Description

No Description!

Coordinates

chr19:+:6484998..6495602

Molecular Weight (calculated)

86158.1 Da

IEP (calculated)

5.409

GRAVY (calculated)

-0.394

Length

771 amino acids

Sequence
(BLAST)

001: MSVVGFDIGN ENCVISVVKQ RGIDVLLNDE SKRETPSVVC FGEKQRILGS AGAASATMNP RSTIFQVKRL IGLNFSEPHI KDELKMFPFE TSEGPDGGIL
101: IHLQYLGERH TFTPVQILAM LFAHLKDITE KNLEFPILDC VIGIPSYFTD LQRRAYLYAA EIAGLKPLRL LHDCTATALG YGIYKTDFSS AGPTYIVFVD
201: IGHCDTQVSI ASFEAGYMKI LSHAYDRSLG SRDFDEVLFK YFAAQFKEQY NIDVYSNVRA SVRLRVACEK LKKVLSANAE APLNIECLMD EKDVKGFIKR
301: EEFENLASGL FERIRVPCNQ ALSDARLTVD KIHAVELVGS GSRIPAISRL LASLFRREPR RTLNVSECVA RGCALQCAML SPIFRVRDYE VQDSLPFSIG
401: FSSDEVPICT MTNSILFPKG QPIPSAKILT FQRSSLFHLE AFYANPNELP AGMPSKIGCF TIGPFQASHG AKVKVKVHLN VHGIVTVESA SLIEDHEDDS
501: VTRDHAQLNS DKMEAESVSG SGSSVAVENG VEDGTSTQSK SSQTTSAGGV RKHKSTRRHE IPVSENIYGG MTEAELSEAQ EKEIQLTQQD RTVEQTKEKK
601: NALESYVYDM RNKLFHTYRS FASDQEREGI SRSLQQTEDW LYEDGDDETE NAYSSRLEDL KMLVDPIENR YKDEEARAQA TRDLLNCIVE HRMSVGSLPP
701: NDGEQILNEC NKAEQWLRER TQQQESLSKN TDPVLWSSDI KKMTEDLDLK CKNILGSRTS PNPEDHKGTG P

Best Arabidopsis Sequence Match ( AT1G11660.4 )
(BLAST)

001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ
101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI
201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK
301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI
401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK
501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY
601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH
701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD

Arabidopsis Description

HSP70-16Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.