Factsheet for VIT_09s0002g04680.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09848	Soybean	endoplasmic reticulum, nucleus	83.84	82.39
PGSC0003DMT400080588	Potato	cytosol	82.19	82.1
KRH23474	Soybean	endoplasmic reticulum	83.49	82.04
Solyc12g043110.1.1	Tomato	plastid	82.08	81.69
Solyc12g043120.1.1	Tomato	extracellular	81.37	81.56
Bra039679.1-P	Field mustard	cytosol	77.24	80.07
CDX76065	Canola	cytosol	76.77	79.98
Bra014713.1-P	Field mustard	cytosol	76.65	79.85
AT1G79930.1	Thale cress	cytosol	78.07	79.66
PGSC0003DMT400080580	Potato	cytosol	81.49	79.43
KRH44373	Soybean	cytosol, endoplasmic reticulum, nucleus	79.25	78.87
KRH47052	Soybean	cytosol, endoplasmic reticulum	78.54	77.71
CDY24089	Canola	endoplasmic reticulum, extracellular	77.24	76.34
GSMUA_Achr7P09800_001	Banana	cytosol	76.42	76.06
GSMUA_Achr5P06230_001	Banana	cytosol	76.3	76.03
GSMUA_Achr2P15830_001	Banana	cytosol	75.71	75.8
GSMUA_Achr2P19660_001	Banana	cytosol	75.83	75.74
EES17815	Sorghum	cytosol	74.29	74.82
AT1G79920.2	Thale cress	cytosol	64.86	74.73
EES19148	Sorghum	cytosol	74.06	73.8
Os01t0180800-01	Rice	plasma membrane	73.35	73.61
Zm00001d037700_P002	Maize	cytosol	72.76	73.36
Zm00001d009948_P004	Maize	cytosol	72.05	73.35
CDY43337	Canola	cytosol	76.89	73.34
TraesCS1A01G120100.4	Wheat	cytosol	72.17	73.29
TraesCS1B01G139500.1	Wheat	cytosol	71.82	73.2
TraesCS1D01G121000.1	Wheat	cytosol	71.93	73.05
TraesCS1D01G121200.3	Wheat	cytosol, golgi, unclear	72.41	72.92
TraesCS1B01G139600.1	Wheat	cytosol, golgi	72.29	72.8
HORVU1Hr1G027420.5	Barley	cytosol	71.23	72.51
HORVU1Hr1G026840.3	Barley	cytosol	71.34	72.46
TraesCS1A01G120200.1	Wheat	cytosol	71.82	72.41
Zm00001d037717_P002	Maize	plastid	71.23	71.65
Zm00001d009950_P002	Maize	cytosol	71.82	70.9
Zm00001d025053_P001	Maize	cytosol	19.58	69.46
Os05t0181000-01	Rice	plasma membrane	69.69	69.28
Zm00001d048458_P006	Maize	cytosol	19.34	68.62
CDY45119	Canola	extracellular	77.0	68.31
CDY32364	Canola	cytosol	20.64	60.34
CDY32367	Canola	cytosol, mitochondrion, plastid	20.52	59.39
CDY67465	Canola	cytosol	18.87	57.35
VIT_19s0090g00340.t01	Wine grape	cytosol	47.76	52.53
TraesCS3B01G298400.1	Wheat	cytosol	24.17	32.59
VIT_04s0008g04410.t01	Wine grape	endoplasmic reticulum	25.24	23.91
VIT_09s0096g00090.t01	Wine grape	endoplasmic reticulum, plastid	25.71	23.34
VIT_07s0005g06650.t01	Wine grape	cytosol	3.3	23.33
VIT_05s0020g03330.t01	Wine grape	cytosol	14.03	20.55
VIT_04s0043g00710.t01	Wine grape	cytosol	16.75	19.19

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100260001	wikigene:100260001	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10
Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	ProteinID:CCB59484	ProteinID:CCB59484.1	ncoils:Coil
UniProt:F6HYG1	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100260001
wikigene:LOC100260001	PFAM:PF00012	PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF322	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	TIGR:TC57366	UniParc:UPI0002109CB4	ArrayExpress:VIT_09s0002g04680	EnsemblPlantsGene:VIT_09s0002g04680
EnsemblPlants:VIT_09s0002g04680.t01	RefSeq:XP_002279789	RefSeq:XP_002279789.2	RefSeq:XP_010654673.1	RefSeq:XP_010654674.1	SEG:seg

Description

No Description!

Coordinates

chr9:+:4243222..4248888

Molecular Weight (calculated)

93323.7 Da

IEP (calculated)

4.874

GRAVY (calculated)

-0.422

Length

848 amino acids

Sequence
(BLAST)

001: MSVVGFDFGN ESCIVAVARQ RGIDVVLNDE SKRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQMKRL IGRQFSDPEL QQDLKSLPFT VTEGPDGYPL
101: IHARYLGEVR TFTPTQVLGM MFSNLKGIAE KNLNAAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL LHETTATALA YGIYKTDLPE NDQLNVAFVD
201: IGHASMQVCI AGYKKGQLKI LAHSFDQSLG GRDFDEVLFN HFAAKFKEEY KIDVFQNARA CLRLRSACEK LKKVLSANPV APLNIECLMD EKDVRGFIKR
301: DEFEQISVPI LERVKGPLEE ALSDAGLSAE NIHAVEVVGS GSRVPAIIRI LTEFFGKEPR RTMNASECVA KGCALQCAIL SPTFKVREFQ VNESFPFTIA
401: LTWKGDAQNG AADNQQNTVV FPKGNPIPSV KALTFYRSGT FSVDVVYADA SEIQGQVKIS TYTIGPFQST KVERAKLKVK VRLNLHGIVS VESATLLEEE
501: EVEIPVVKEP AKDATKMDTD ETPGDAAAPP GTSETDANMQ DAKGDAPGVE NGVPESGDKS VQMETDTKVE VPKKKVKKTN IPVSELVYGT MVPADVQKAV
601: EKEFEMALQD RVMEETKDKK NAVEAYVYDM RNKLHDKYQD FVTSSERDEF TAKLQEVEDW LYEDGEDETK GVYIAKLEEL KKQGDPIEER YKEYSERGTV
701: VDQLVYCINS YREAAMSNDP KFEHIDVSEK QKVLSECVEA EAWLREKKQQ QDSLPKHATP VLLSADVRRK AEAVDRACRP IMTKPKPAKP AAPETPPTPP
801: PQGNEPQPQG GENAASAHDS AADGSSSEVP PAAAEPMDTD KSETTTAA

Best Arabidopsis Sequence Match ( AT1G79930.1 )
(BLAST)

001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL IHETTATALA YGIYKTDLPE SDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPL APLNIECLMD EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVIGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAASEA QNGGAENQQS TIVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVPVT KEHSEETTKM DSDKASAEAA PASGDCDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER
701: GSVIDQLGYC INSYREAAMS TDPKFDHIEL AEKQKVLNEC VEAEAWLRGK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP VAKAEAPQAK
801: GGEQADEGKS EPEQPASAEP METENPAEGS T

Arabidopsis Description

HSP70-14Heat shock 70 kDa protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.