Factsheet for VIT_05s0020g03330.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77864	Soybean	cytosol	77.72	78.81
PGSC0003DMT400077358	Potato	cytosol	75.65	76.44
Solyc09g075950.1.1	Tomato	plastid	74.27	74.65
CDY12232	Canola	cytosol	70.12	72.11
Bra005610.1-P	Field mustard	cytosol	70.12	71.99
CDY70083	Canola	cytosol	70.12	71.99
AT2G32120.1	Thale cress	cytosol	69.43	71.4
Os03t0218500-01	Rice	cytosol	67.53	67.65
TraesCS4B01G243400.1	Wheat	cytosol	67.18	67.07
GSMUA_Achr9P19260_001	Banana	cytosol	68.05	67.01
TraesCS4D01G243000.1	Wheat	cytosol	66.67	66.44
Zm00001d048073_P001	Maize	cytosol	65.8	65.92
TraesCS4A01G066100.1	Wheat	cytosol	65.98	65.41
EER92633	Sorghum	plastid	66.32	60.09
VIT_07s0005g06650.t01	Wine grape	cytosol	4.32	20.83
VIT_19s0090g00340.t01	Wine grape	cytosol	20.21	15.18
VIT_09s0002g04680.t01	Wine grape	cytosol	20.55	14.03
VIT_04s0008g04410.t01	Wine grape	endoplasmic reticulum	17.44	11.28
VIT_09s0096g00090.t01	Wine grape	endoplasmic reticulum, plastid	17.1	10.6
VIT_04s0043g00710.t01	Wine grape	cytosol	9.67	7.57

Protein Annotations

EntrezGene:100252916	wikigene:100252916	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	EMBL:AM468012	ProteinID:CAN68225	ProteinID:CAN68225.1	ProteinID:CCB50417	ProteinID:CCB50417.1
UniProt:F6HDP6	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009644	GO:GO:0042542
InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	EntrezGene:LOC100252916	wikigene:LOC100252916	PFAM:PF00012
PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF101	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGR:TC53367
UniParc:UPI000210A12C	ArrayExpress:VIT_05s0020g03330	EnsemblPlantsGene:VIT_05s0020g03330	EnsemblPlants:VIT_05s0020g03330.t01	unigene:Vvi.2385	RefSeq:XP_002282143
RefSeq:XP_002282143.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:+:5092723..5096216

Molecular Weight (calculated)

62957.3 Da

IEP (calculated)

5.720

GRAVY (calculated)

0.087

Length

579 amino acids

Sequence
(BLAST)

001: MSNAGMAEQA YTVASDSETT GEEKISSAFP EIAIGIDIGT SQCSVAVWNG TQVELLKNTR NQKMMRSFVT FKDEIPSGGV SNQVSNELDI LSGAAIFNMK
101: RLIGRVDTDP VVHASKSLPF LVHTMNIGIR PFIAALVNNV WRATTPEEVL AIFLVELRTM AEEQLKRPIR NVVLTVPVSF NRFQLTRIER ACAMAGLHVL
201: RLMPEPTAVA LLYAQQQQQT IHENMGSGNE KVALIFNMGA GYCDVAITAT AGGISQIKAL SGTTMGGEDM LQNLMNHLVP NSESFFFNHG INDIKSIGLL
301: RVAAQDAIHK LSYQTSVLVE VDLGNGLKIS KVVSQVEFEE LNHDVFEKCR SLIIQCLHDA KVEVEDVSDV ILVGGCSHIP MIRNVVKDIC KGREIYAGMN
401: SLEAAVTGAA LEGAVASGIS DPFGNLDLLT IQATPLSIGI RADGNNVVHI INRNTTIPAR KELVFSTAHD NQTEALIAVY EGEGKKVEEN HLLGFFKITR
501: IPPLPKGVPE LNVCMDIDAS NVLRVLAGVV LPGNKQLVTP FMEVRMPTVD DGHGWCAEAI HRTHGSTLDL VTLWKKAME

Best Arabidopsis Sequence Match ( AT2G32120.1 )
(BLAST)

001: MAEAAYTVAS DSENTGEEKS SSSPSLPEIA LGIDIGTSQC SIAVWNGSQV HILRNTRNQK LIKSFVTFKD EVPAGGVSNQ LAHEQEMLTG AAIFNMKRLV
101: GRVDTDPVVH ASKNLPFLVQ TLDIGVRPFI AALVNNAWRS TTPEEVLAIF LVELRLMAEA QLKRPVRNVV LTVPVSFSRF QLTRFERACA MAGLHVLRLM
201: PEPTAIALLY AQQQQMTTHD NMGSGSERLA VIFNMGAGYC DVAVTATAGG VSQIKALAGS PIGGEDILQN TIRHIAPPNE EASGLLRVAA QDAIHRLTDQ
301: ENVQIEVDLG NGNKISKVLD RLEFEEVNQK VFEECERLVV QCLRDARVNG GDIDDLIMVG GCSYIPKVRT IIKNVCKKDE IYKGVNPLEA AVRGAALEGA
401: VTSGIHDPFG SLDLLTIQAT PLAVGVRANG NKFIPVIPRN TMVPARKDLF FTTVQDNQKE ALIIIYEGEG ETVEENHLLG YFKLVGIPPA PKGVPEINVC
501: MDIDASNALR VFAAVLMPGS SSPVVPVIEV RMPTVDDGHG WCAQALNVKY GATLDLITLQ RKM

Arabidopsis Description

HSP70-8Heat shock 70 kDa protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.