CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048073_P001	Maize	cytosol	86.54	95.67
Os03t0218500-01	Rice	cytosol	80.59	89.1
TraesCS4D01G243000.1	Wheat	cytosol	79.97	87.95
TraesCS4B01G243400.1	Wheat	cytosol	79.5	87.59
TraesCS4A01G066100.1	Wheat	cytosol	79.66	87.16
GSMUA_Achr9P19260_001	Banana	cytosol	64.16	69.73
KRH77864	Soybean	cytosol	61.97	69.35
PGSC0003DMT400077358	Potato	cytosol	61.66	68.76
Solyc09g075950.1.1	Tomato	plastid	60.72	67.36
Bra005610.1-P	Field mustard	cytosol	59.31	67.2
CDY70083	Canola	cytosol	59.15	67.02
CDY12232	Canola	cytosol	59.0	66.96
AT2G32120.1	Thale cress	cytosol	58.69	66.61
VIT_05s0020g03330.t01	Wine grape	cytosol	60.09	66.32
OQU92817	Sorghum	cytosol	13.3	28.43
EER97842	Sorghum	endoplasmic reticulum, golgi	15.96	23.45
EES16657	Sorghum	endoplasmic reticulum, golgi	15.65	22.83
EES18790	Sorghum	endoplasmic reticulum, extracellular, golgi	12.05	17.34
OQU76890	Sorghum	cytosol	16.28	13.27
EES17815	Sorghum	cytosol	16.9	12.83
EES19148	Sorghum	cytosol	16.74	12.57
KXG30896	Sorghum	endoplasmic reticulum	15.49	10.67

Protein Annotations

MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EntrezGene:8085292
UniProt:C5WSQ6	EnsemblPlants:EER92633	ProteinID:EER92633	ProteinID:EER92633.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009644	GO:GO:0042542	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF101	EnsemblPlantsGene:SORBI_3001G454000
SUPFAM:SSF100920	SUPFAM:SSF53067	unigene:Sbi.5831	UniParc:UPI0001A8280D	RefSeq:XP_002465635.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:73039652..73043648

Molecular Weight (calculated)

69735.7 Da

IEP (calculated)

8.401

GRAVY (calculated)

-0.107

Length

639 amino acids

Sequence
(BLAST)

001: MRPGYSPFPL LLPPSTSFSP LRTPRIARPQ QLLFSYPKKR HRAPPGDSPT RRRRRRRRLA KMAEQLYTVA SDSETTGEDK SQPSFPDVAI GIDIGTSKCS
101: VAVWNGHQVE LLKNTRNQKG MRSYVMFKDD TLSAGVTGGA AKENAHEERD ILSGSAIFNM KRLIGRMDTD EVVQASKTLP FLVQTLGIGV RPFIAALVNN
201: MWRSTTPEEV LAIFLLELKA LVEMHLKHPV RNAVLTIPVA FSRFQQTRIE RACAMAGLHV LRLMPEPTAV ALLYAQQQQQ LVNDNMGSGI EKIALIFNMG
301: AGYCDAAVAA TAGGVSQIRA LSGCTAGGED ILQNIMRHVV PNFDNLYAGQ TMDRIQSMSL LRMATQDAIH KLVNQETVEI NIDLGNGHKV SKVLDHSEFE
401: QVNRAIFDKC EKIINQCLVD AKLVPEDIND VILVGGCSKI PRIRSLVLGL CKKEISYKNI DALEAAVSGA ALEGAIASGV NDPSGSLDLL TIQATPMNLG
501: IRANGDSFAA IIPRNTTVPA RRDMLFTTTH DNQTEALIAV YEGEGERAED NHLLGYFKIT GIPAAPKGTV EISVCMDIDA TNVLRVFAGV VKPQGPATPP
601: FIEVRMPTLD DGHGWCGQAL AKMYGKTLDL AVLPKKLQP

Best Arabidopsis Sequence Match ( AT2G32120.1 )
(BLAST)

001: MAEAAYTVAS DSENTGEEKS SSSPSLPEIA LGIDIGTSQC SIAVWNGSQV HILRNTRNQK LIKSFVTFKD EVPAGGVSNQ LAHEQEMLTG AAIFNMKRLV
101: GRVDTDPVVH ASKNLPFLVQ TLDIGVRPFI AALVNNAWRS TTPEEVLAIF LVELRLMAEA QLKRPVRNVV LTVPVSFSRF QLTRFERACA MAGLHVLRLM
201: PEPTAIALLY AQQQQMTTHD NMGSGSERLA VIFNMGAGYC DVAVTATAGG VSQIKALAGS PIGGEDILQN TIRHIAPPNE EASGLLRVAA QDAIHRLTDQ
301: ENVQIEVDLG NGNKISKVLD RLEFEEVNQK VFEECERLVV QCLRDARVNG GDIDDLIMVG GCSYIPKVRT IIKNVCKKDE IYKGVNPLEA AVRGAALEGA
401: VTSGIHDPFG SLDLLTIQAT PLAVGVRANG NKFIPVIPRN TMVPARKDLF FTTVQDNQKE ALIIIYEGEG ETVEENHLLG YFKLVGIPPA PKGVPEINVC
501: MDIDASNALR VFAAVLMPGS SSPVVPVIEV RMPTVDDGHG WCAQALNVKY GATLDLITLQ RKM

Arabidopsis Description

HSP70-8Heat shock 70 kDa protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.