Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 7
- extracellular 4
- vacuole 4
- plasma membrane 4
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G014490.1 | Barley | cytosol | 48.4 | 49.42 |
| TraesCS5D01G070100.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 48.4 | 47.75 |
| TraesCS5B01G065900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 47.95 | 46.77 |
| EER97842 | Sorghum | endoplasmic reticulum, golgi | 45.89 | 46.21 |
| EES18790 | Sorghum | endoplasmic reticulum, extracellular, golgi | 38.36 | 37.84 |
| OQU92817 | Sorghum | cytosol | 23.06 | 33.78 |
| EER92633 | Sorghum | plastid | 22.83 | 15.65 |
| OQU76890 | Sorghum | cytosol | 20.78 | 11.61 |
| KXG30896 | Sorghum | endoplasmic reticulum | 22.83 | 10.78 |
| EES19148 | Sorghum | cytosol | 20.78 | 10.69 |
| EES17815 | Sorghum | cytosol | 20.55 | 10.69 |
Protein Annotations
| Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | MapMan:35.1 | EntrezGene:8066979 | UniProt:C5YS30 | EnsemblPlants:EES16657 |
| ProteinID:EES16657 | ProteinID:EES16657.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:Hsp_70_fam | PFAM:PF00012 | PRINTS:PR00301 | PANTHER:PTHR19375 | PANTHER:PTHR19375:SF201 | EnsemblPlantsGene:SORBI_3008G038700 |
| SUPFAM:SSF53067 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A885A5 | RefSeq:XP_002442819.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:3664254..3666130
Molecular Weight (calculated)
48153.4 Da
IEP (calculated)
5.340
GRAVY (calculated)
-0.171
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGNRRPPA ATLPAVLILV CVLVASASGL QMLPDEDPST YPEDSSRPRE FWYPRGEVIV IDLGNTNSCV AGYTGSGKTT DDDDDTMFQF CIPSWVAFTD
101: NGTALVGEAA KNHAAADPEA TIFGFKRLLG LRRNRWYDED IVQGAIQRVP YKIGTRNYDT TIVQVKNKQL EFSEVASMVV AELKNKAEEY LGRRVEYAVM
201: TIPFHFAAAH RGAAEYAGKM AGLDVVWTVT EPTAAAVAHG LHTKLHEHGA ALVLRVGGGT SDASVLILLD GRFEVFRYRD DPFLGGDDFD DRVVDYFAKQ
301: IKMKHGVDIS QDRVGLGKLR MACENAKKAL SSQDHVQVTA ESLVDGVDFS EPLSRSQFEE LNDDLFCKVM DLVENVMVRA GIERRKNKIN EIVLVGGSAM
401: IPKIQSLVKD YFDGREPNIR VKPDEAMALG AAIHVHSL
101: NGTALVGEAA KNHAAADPEA TIFGFKRLLG LRRNRWYDED IVQGAIQRVP YKIGTRNYDT TIVQVKNKQL EFSEVASMVV AELKNKAEEY LGRRVEYAVM
201: TIPFHFAAAH RGAAEYAGKM AGLDVVWTVT EPTAAAVAHG LHTKLHEHGA ALVLRVGGGT SDASVLILLD GRFEVFRYRD DPFLGGDDFD DRVVDYFAKQ
301: IKMKHGVDIS QDRVGLGKLR MACENAKKAL SSQDHVQVTA ESLVDGVDFS EPLSRSQFEE LNDDLFCKVM DLVENVMVRA GIERRKNKIN EIVLVGGSAM
401: IPKIQSLVKD YFDGREPNIR VKPDEAMALG AAIHVHSL
001: MIFIKENTAK MTRNKAIACL VFLTALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA AKNQAAKNPE
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
Arabidopsis Description
MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.