Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017809_P002 Maize plasma membrane 93.0 93.1
HORVU2Hr1G036440.8 Barley cytosol 10.02 90.29
Zm00001d051607_P004 Maize endoplasmic reticulum 82.11 84.76
HORVU6Hr1G001950.1 Barley cytosol 18.21 84.08
HORVU1Hr1G040940.1 Barley cytosol 10.88 81.45
TraesCS6D01G257000.1 Wheat endoplasmic reticulum 74.25 78.21
TraesCS6B01G304200.1 Wheat golgi 74.46 77.99
TraesCS6A01G276700.1 Wheat endoplasmic reticulum, unclear 74.35 77.88
HORVU1Hr1G077070.2 Barley cytosol 19.94 76.76
Zm00001d051609_P004 Maize cytosol 36.64 72.81
TraesCS1B01G206700.1 Wheat cytosol 17.35 64.92
CDY32270 Canola cytosol, mitochondrion, plastid 53.66 63.2
GSMUA_Achr6P09420_001 Banana endoplasmic reticulum 60.56 62.93
GSMUA_Achr10P... Banana endoplasmic reticulum 60.67 62.83
VIT_04s0008g04410.t01 Wine grape endoplasmic reticulum 59.59 61.79
CDX90500 Canola endoplasmic reticulum 56.79 60.64
Bra012696.1-P Field mustard endoplasmic reticulum 56.68 60.53
PGSC0003DMT400041135 Potato extracellular 57.87 60.34
CDY40516 Canola cytosol 54.2 60.24
Solyc07g043560.2.1 Tomato plastid 57.76 60.22
CDY60712 Canola endoplasmic reticulum 56.36 60.18
KRH17619 Soybean endoplasmic reticulum 57.33 59.71
Bra038496.1-P Field mustard endoplasmic reticulum 54.42 59.69
KRG90078 Soybean endoplasmic reticulum 57.11 59.35
KRH51336 Soybean cytosol 35.24 59.35
AT4G16660.2 Thale cress endoplasmic reticulum, mitochondrion 56.9 59.26
VIT_09s0096g00090.t01 Wine grape endoplasmic reticulum, plastid 59.05 58.67
VIT_04s0043g00710.t01 Wine grape cytosol 40.84 51.22
OQU92817 Sorghum cytosol 8.51 26.42
OQU76890 Sorghum cytosol 21.34 25.26
EER97842 Sorghum endoplasmic reticulum, golgi 11.42 24.37
EES17815 Sorghum cytosol 20.91 23.04
EES16657 Sorghum endoplasmic reticulum, golgi 10.78 22.83
EES19148 Sorghum cytosol 20.8 22.68
EES18790 Sorghum endoplasmic reticulum, extracellular, golgi 9.48 19.82
EER92633 Sorghum plastid 10.67 15.49
Protein Annotations
Gene3D:1.20.1270.10MapMan:19.1.1.2.5Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10UniProt:A0A194YRT0
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sfInterPro:Heat_shock_70_CSInterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048EnsemblPlants:KXG30896
ProteinID:KXG30896ProteinID:KXG30896.1PFAM:PF00012PRINTS:PR00301ScanProsite:PS01036PANTHER:PTHR19375
PANTHER:PTHR19375:SF320EnsemblPlantsGene:SORBI_3004G263500SUPFAM:SSF100934SUPFAM:SSF53067SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001C80BFDSEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:60838656..60844513
Molecular Weight (calculated)
103797.0 Da
IEP (calculated)
9.669
GRAVY (calculated)
-0.379
Length
928 amino acids
Sequence
(BLAST)
001: MSQPRSWGVL LAVLVAAAVA VPPATAAVAS IDLGSEWLKV AAVHLAPGRA PIAVAINEMS KRKSPALAAL ADGNRLAGEE AAGITARHPS KVFARARDLL
101: AKPFSYVQSV TESLFLPYDL VPDARGAAAV RADDGQVYSL EEIVAMVLHY AAGLADAHVG APVRDAVITV PPYFGQAERR ALTQAAQLAG INVLSLIHEH
201: AGAALQYGID KDFSNASRHV IFYDMGAGST YAALVYYSAY NAKEFGKTVS VNQFQVKDVR WNSELGGVEL EMRLVNYFAD QFNKQLGNGV DIRQSPKAMA
301: KLKKQVKRTK EILSANTAAP ISVESLYNDA DFRSTITREK FEELCEDLWE QALTPVKEVL THSGMKIDDI YAVELIGGAT RVPKLQAKLQ EFLGRRELDK
401: HLDADEATVL GASLHAANLS DGIKLNRKLG MIDGSTYALV LEIDGPGYVK DESIDQTLVP RMKKMPIKMF RSIRHTKDFD ISLNYDKAYE LPPGIPSHKF
501: AEYSISGLSD ANEKYAHRNL SAPIKANLHF SLSRSGIIAL DRAEAVIEIT EWVEVPKKIL TLESNTTNQN SSSEVGAANS TTDSKENMSS GSDTNSNTSV
601: NESNAQEIIT EKVLKKRTFR VPLKVVEKTT GAGTILSKEL YSEAKNRLEA LDKKDAERRK TAELKNNLES YIYSMKEKLE ESTDILTVST EQERESFAEK
701: LSEVQDWLYM DGEDAQANEF QERLDQLKAI GDPILFRLSE LKARPAACEN ARLYLDELQK IVKNWDANKP WLPKKRVDEV VREAEKLKAW LEEKENLQKK
801: YNLLSQLSFF LLSCKRWLTP VGNFAVPLSI AHQFSHLKKL MRKFWTCKIR SQVSIGFRNQ NPRLRRKQQR RKNLLARRKP PLRNLHPTRV NTPKRLRNLR
901: LKKRISLHRP TLAIQNLNLM TSCEYQNP
Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)
001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL
Arabidopsis Description
heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.