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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
 extracellular: 22313117
msms PMID: 22313117 doi
S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto
Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g043560.2.1 Tomato plastid 96.29 96.29
HORVU2Hr1G036440.8 Barley cytosol 9.44 81.55
HORVU6Hr1G001950.1 Barley cytosol 17.19 76.12
HORVU1Hr1G040940.1 Barley cytosol 10.22 73.39
VIT_04s0008g04410.t01 Wine grape endoplasmic reticulum 70.79 70.39
VIT_09s0096g00090.t01 Wine grape endoplasmic reticulum, plastid 70.79 67.45
KRH17619 Soybean endoplasmic reticulum 67.42 67.34
HORVU1Hr1G077070.2 Barley cytosol 18.2 67.22
KRG90078 Soybean endoplasmic reticulum 67.19 66.97
CDX90500 Canola endoplasmic reticulum 65.06 66.63
Bra012696.1-P Field mustard endoplasmic reticulum 64.94 66.51
CDY32270 Canola cytosol, mitochondrion, plastid 58.76 66.37
CDY60712 Canola endoplasmic reticulum 64.72 66.28
AT4G16660.2 Thale cress endoplasmic reticulum, mitochondrion 66.18 66.11
GSMUA_Achr10P... Banana endoplasmic reticulum 66.4 65.96
CDY40516 Canola cytosol 61.8 65.87
KRH51336 Soybean cytosol 40.45 65.34
Bra038496.1-P Field mustard endoplasmic reticulum 62.02 65.25
GSMUA_Achr6P09420_001 Banana endoplasmic reticulum 65.28 65.06
TraesCS6B01G304200.1 Wheat golgi 63.93 64.22
TraesCS6D01G257000.1 Wheat endoplasmic reticulum 63.37 64.02
TraesCS6A01G276700.1 Wheat endoplasmic reticulum, unclear 63.71 64.0
Zm00001d051607_P004 Maize endoplasmic reticulum 64.49 63.85
TraesCS1B01G206700.1 Wheat cytosol 17.42 62.5
VIT_04s0043g00710.t01 Wine grape cytosol 48.76 58.65
Zm00001d017809_P002 Maize plasma membrane 60.56 58.14
KXG30896 Sorghum endoplasmic reticulum 60.34 57.87
Zm00001d051609_P004 Maize cytosol 30.11 57.39
PGSC0003DMT400080580 Potato cytosol 23.82 24.37
PGSC0003DMT400080588 Potato cytosol 23.15 24.26
PGSC0003DMT400050462 Potato cytosol 13.03 22.88
PGSC0003DMT400077358 Potato cytosol 12.13 18.85
Protein Annotations
Gene3D:1.20.1270.10EntrezGene:102604222MapMan:19.1.1.2.5Gene3D:2.60.34.10Gene3D:3.30.30.30Gene3D:3.30.420.40
Gene3D:3.90.640.10ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524
InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Heat_shock_70_CSInterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048
UniProt:M1BAZ0PFAM:PF00012EnsemblPlantsGene:PGSC0003DMG400015920PGSC:PGSC0003DMG400015920EnsemblPlants:PGSC0003DMT400041135PRINTS:PR00301
ScanProsite:PS01036PANTHER:PTHR19375PANTHER:PTHR19375:SF320SUPFAM:SSF100934SUPFAM:SSF53067SignalP:SignalP-noTM
UniParc:UPI0002956283RefSeq:XP_006357886.1SEG:seg:::
Description
Heat shock 70 kDa protein [Source:PGSC_GENE;Acc:PGSC0003DMG400015920]
Coordinates
chr7:-:42050311..42058237
Molecular Weight (calculated)
98960.9 Da
IEP (calculated)
6.034
GRAVY (calculated)
-0.531
Length
890 amino acids
Sequence
(BLAST)
001: MPAKNMLFRL GIFLSLFLLN PIPSQSAVSS IDLGSEWFKV AVVNLKPGQP PISIAINEMS KRKTPSLVAF HSGSRLIGEE ASGIVARYPN KVYSHLRDLI
101: SKPFSHVSKT LESLYLSYDI SPEESRNVAV FKTENGNFTA EELVAMLFKY ALGLAEAHTR GTPVKDAVVT VPPYMGVAER KGLLVAAELA GINVLALVNE
201: HSGAALQYGI DKDFSNGSRH VIFYDMGAGS TYAALVYFSA YNTKEFGKTV SANQFQVKDV RWDAELGGEH MELRLVEHFA DEFNKQVGNG VDIRKSPKAM
301: AKLKKQVKRT KEILSANTAA PISVESIYDD RDFRSSITRE KFEELCADLW EKALVPLKEV LTHSGLKIED IYAVELIGGA TRVPKLQAKL QEFLGRKELD
401: RHLDSDEAIT LGASLHAANI SDGIKLNRKL GMIDGSPYGY VIEVDGPDLP KDESTKQLTI PRMKKLPSKM FRSIVHKKDF EVSLAYESDD FLPPGTTSRT
501: FAQYAVSGLT DASEKYASRN LSAPVKANLH FSLSRSGIFS LDRADAVIEI TEWVEVPLKN LTVDNSTSAS VNTSTESGPT STEESDEKLN TDTVNSNTSD
601: PGTNDSSTIS PVTEKKLKKR TFRVPLKIDE KITGPGAPLS KESFSEAKRK LEALDKKDEE RRRTAELKNS LEGYIYDTRD KLESGDFVKI STSQECQSFI
701: EKLDEVQEWL YTDGEDASAT QFQEHLDKLK AIGDPIFFRH KELTARPAAS DHARKYLNEV QQIVRGWETN KSWLPKGKID EVLNEAEKVK KWLNQKEAEQ
801: KDTPGSDMPA FTSEEVYVKV FDLQDKVNKV NKIPKPKPKV EKPLKNETEN SKEKADTTKS SSEEGTSQKE QTAAEAEKAS ADEKSDHDEL
Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)
001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL
Arabidopsis Description
heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.