Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G070100.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 89.98 | 90.99 |
| HORVU5Hr1G014490.1 | Barley | cytosol | 85.52 | 89.51 |
| EES16657 | Sorghum | endoplasmic reticulum, golgi | 46.77 | 47.95 |
| TraesCS7B01G369100.1 | Wheat | endoplasmic reticulum | 37.42 | 39.07 |
| TraesCS4B01G342600.1 | Wheat | endoplasmic reticulum | 34.97 | 37.74 |
| TraesCS4B01G243400.1 | Wheat | cytosol | 23.39 | 18.1 |
| TraesCS1B01G163400.2 | Wheat | mitochondrion | 24.28 | 16.72 |
| TraesCS3B01G298400.1 | Wheat | cytosol | 22.05 | 15.74 |
| TraesCS7B01G359100.1 | Wheat | cytosol | 24.28 | 14.89 |
| TraesCS1B01G139500.1 | Wheat | cytosol | 24.05 | 12.98 |
| TraesCS1B01G139600.1 | Wheat | cytosol, golgi | 24.05 | 12.83 |
| TraesCS1B01G206700.1 | Wheat | cytosol | 6.68 | 12.1 |
| TraesCS6B01G304200.1 | Wheat | golgi | 22.49 | 11.4 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G065900.1 | EnsemblPlantsGene:TraesCS5B01G065900 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam |
| PANTHER:PTHR19375 | PANTHER:PTHR19375:SF201 | PFAM:PF00012 | PFscan:PS51257 | PRINTS:PR00301 | ScanProsite:PS01036 |
| SignalP:SignalP-noTM | SUPFAM:SSF53067 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5B:-:74141600..74142949
Molecular Weight (calculated)
48909.7 Da
IEP (calculated)
5.881
GRAVY (calculated)
-0.108
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMVDVRVAG LAAILVSILA CFLLLDQAGA FTGNQTPYSP SPAIAIDLGN TNSCVAGYGH GNGQAETMFQ LCIPTWVAFP GDGSVLVGED AKNHAAPIFG
101: FKRLLGKRRD FEREEENVRE LMARVPYKVV GRERPLVQVK MVADGAVKNL GADEITAMVF AKLRESAEAY LGRAIQEAVV TVPQQYNDPA RYSILRAAEL
201: AGLRVTRLID EPTAAAVAHG LHRKLRDEGN VLVLHMGGGT SDASVMSYVD GVFEFMGADE DPFLGGQDFD QRIVDHFVKL IRKKHGKDLI RNDDKGSALG
301: RLRTACEQAK KALSSQDVAE LSIKSLVDGV DFSASLTRAE FEELNHDLFL KAMALVESAM RQAELDKNKD LLDEIVLVGG STMVPGIRRL VTDYFDGRRK
401: LKNVNASVMP DQTVTLGAAL LSHPTANGYP CMGGDRRQWG YSTDWCFTD
101: FKRLLGKRRD FEREEENVRE LMARVPYKVV GRERPLVQVK MVADGAVKNL GADEITAMVF AKLRESAEAY LGRAIQEAVV TVPQQYNDPA RYSILRAAEL
201: AGLRVTRLID EPTAAAVAHG LHRKLRDEGN VLVLHMGGGT SDASVMSYVD GVFEFMGADE DPFLGGQDFD QRIVDHFVKL IRKKHGKDLI RNDDKGSALG
301: RLRTACEQAK KALSSQDVAE LSIKSLVDGV DFSASLTRAE FEELNHDLFL KAMALVESAM RQAELDKNKD LLDEIVLVGG STMVPGIRRL VTDYFDGRRK
401: LKNVNASVMP DQTVTLGAAL LSHPTANGYP CMGGDRRQWG YSTDWCFTD
001: MIFIKENTAK MTRNKAIACL VFLTALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA AKNQAAKNPE
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
Arabidopsis Description
MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.