CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70083	Canola	cytosol	98.76	98.58
AT2G32120.1	Thale cress	cytosol	89.17	89.17
KRH77864	Soybean	cytosol	75.84	74.78
PGSC0003DMT400077358	Potato	cytosol	74.6	73.3
Solyc09g075950.1.1	Tomato	plastid	74.25	72.57
VIT_05s0020g03330.t01	Wine grape	cytosol	72.11	70.12
Os03t0218500-01	Rice	cytosol	67.67	65.92
Zm00001d048073_P001	Maize	cytosol	67.32	65.57
TraesCS4B01G243400.1	Wheat	cytosol	66.61	64.66
TraesCS4D01G243000.1	Wheat	cytosol	66.43	64.37
TraesCS4A01G066100.1	Wheat	cytosol	66.07	63.7
GSMUA_Achr9P19260_001	Banana	cytosol	66.43	63.61
EER92633	Sorghum	plastid	66.96	59.0
CDY31804	Canola	cytosol	22.2	29.98
CDY03437	Canola	cytosol	14.03	29.92
CDY02235	Canola	cytosol	9.59	29.19
CDY36723	Canola	cytosol	9.77	28.21
CDY53148	Canola	cytosol	12.61	27.73
CDY40361	Canola	cytosol	11.72	27.5
CDY16796	Canola	cytosol	11.55	27.31
CDY16175	Canola	cytosol	12.43	27.24
CDY10445	Canola	cytosol	11.55	27.08
CDY15421	Canola	cytosol	11.55	27.08
CDX85038	Canola	cytosol	12.43	26.62
CDY04444	Canola	mitochondrion	8.35	26.26
CDY32364	Canola	cytosol	12.61	24.48
CDX89754	Canola	plastid	9.59	24.11
CDY32367	Canola	cytosol, mitochondrion, plastid	12.43	23.89
CDY67465	Canola	cytosol	7.82	15.77
CDX76065	Canola	cytosol	21.31	14.74
CDX97975	Canola	cytosol	19.89	14.72
CDY49794	Canola	cytosol	19.72	14.59
CDY24089	Canola	endoplasmic reticulum, extracellular	21.31	13.99
CDY43337	Canola	cytosol	21.31	13.5
CDY45119	Canola	extracellular	21.49	12.66
CDY32270	Canola	cytosol, mitochondrion, plastid	17.58	12.56
CDY60712	Canola	endoplasmic reticulum	18.47	11.97
CDX90500	Canola	endoplasmic reticulum	18.47	11.97
CDY40516	Canola	cytosol	17.23	11.62

Protein Annotations

MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078FGZ0
UniProt:A0A078FGZ0	EnsemblPlants:CDY12232	ProteinID:CDY12232	ProteinID:CDY12232.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00061266001	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF101
SUPFAM:SSF100920	SUPFAM:SSF53067	UniParc:UPI0004EF0701	SEG:seg	:	:

Description

BnaC04g12620DBnaC04g12620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGZ0]

Coordinates

chrLK032018:+:640358..642049

Molecular Weight (calculated)

60549.0 Da

IEP (calculated)

5.267

GRAVY (calculated)

0.069

Length

563 amino acids

Sequence
(BLAST)

001: MAEPAYTVAS DSENTGEEKS SSSPSLPEIA VGIDIGTSQC SIAVWNGSQV HILRNTRNQK LIKSFVTFKD EVPAGGVSNQ LAHEQEMLTG AAVFNMKRLI
101: GRVDTDPVVH ASKSLPFLVQ TLDIGVRPFI AALVNNAWRS TTPEEVLAIF LVELRLMAES QLKRAVRNVV LTVPVSFSRF QLTRIERACA MAGLHVLRLM
201: PEPTAVALLY AQQQQMTSHD NMGSGSERVA VIFNMGAGYC DVAVTATAGG VSQIKALAGS AVGGEDILQN TMRHIAPRPD KEGSGSLRVA TQDAIHRLSK
301: QDSVQIEVDL GDGDVVSKVL DRLEFEEVNK NVFEECERLV VQCLRDAKVD VDDVDDVIMV GGCSYIPKVR AIVSNVCKKE EIYKDVNPLE AAVRGAALEG
401: AVTSGIHDPF GSLDLLTIQA TALAVGVRAN GNKFVPVIPR NTMVPARRDL FFTTVHDDQK EALIVVYEGE GEGVGENHLL GYFKIVGIPA AAKGVPEINV
501: CMDIDASNAL RVFAAVLMPG SKSPVVPVVE VRMPTVDDGH GWCAQALSAK FGSALDLVTL QRK

Best Arabidopsis Sequence Match ( AT2G32120.1 )
(BLAST)

001: MAEAAYTVAS DSENTGEEKS SSSPSLPEIA LGIDIGTSQC SIAVWNGSQV HILRNTRNQK LIKSFVTFKD EVPAGGVSNQ LAHEQEMLTG AAIFNMKRLV
101: GRVDTDPVVH ASKNLPFLVQ TLDIGVRPFI AALVNNAWRS TTPEEVLAIF LVELRLMAEA QLKRPVRNVV LTVPVSFSRF QLTRFERACA MAGLHVLRLM
201: PEPTAIALLY AQQQQMTTHD NMGSGSERLA VIFNMGAGYC DVAVTATAGG VSQIKALAGS PIGGEDILQN TIRHIAPPNE EASGLLRVAA QDAIHRLTDQ
301: ENVQIEVDLG NGNKISKVLD RLEFEEVNQK VFEECERLVV QCLRDARVNG GDIDDLIMVG GCSYIPKVRT IIKNVCKKDE IYKGVNPLEA AVRGAALEGA
401: VTSGIHDPFG SLDLLTIQAT PLAVGVRANG NKFIPVIPRN TMVPARKDLF FTTVQDNQKE ALIIIYEGEG ETVEENHLLG YFKLVGIPPA PKGVPEINVC
501: MDIDASNALR VFAAVLMPGS SSPVVPVIEV RMPTVDDGHG WCAQALNVKY GATLDLITLQ RKM

Arabidopsis Description

HSP70-8Heat shock 70 kDa protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.