CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02235	Canola	cytosol	90.77	95.68
CDX89754	Canola	plastid	90.77	79.02
CDY53148	Canola	cytosol	92.31	70.31
CDY04444	Canola	mitochondrion	64.1	69.83
CDY16175	Canola	cytosol	91.79	69.65
CDX85038	Canola	cytosol	91.79	68.06
GSMUA_Achr2P16250_001	Banana	cytosol	84.62	67.35
CDY40361	Canola	cytosol	80.0	65.0
CDY15421	Canola	cytosol	80.0	65.0
CDY10445	Canola	cytosol	80.0	65.0
CDY16796	Canola	cytosol	78.97	64.71
CDY31804	Canola	cytosol	91.79	42.93
OQU92817	Sorghum	cytosol	61.54	40.13
KRH70478	Soybean	cytosol	47.18	32.74
TraesCS6A01G342400.1	Wheat	cytosol	67.18	26.68
KRH01639	Soybean	cytosol	86.15	25.97
Zm00001d007706_P001	Maize	cytosol	29.74	17.11
CDY32364	Canola	cytosol	25.13	16.9
CDY32367	Canola	cytosol, mitochondrion, plastid	25.13	16.72
CDY03437	Canola	cytosol	19.49	14.39
HORVU6Hr1G082550.1	Barley	cytosol	20.51	10.18
CDY12232	Canola	cytosol	28.21	9.77
CDY70083	Canola	cytosol	28.21	9.75
CDX76065	Canola	cytosol	35.38	8.48
CDY24089	Canola	endoplasmic reticulum, extracellular	35.38	8.04
CDY49794	Canola	cytosol	30.77	7.88
CDX97975	Canola	cytosol	30.77	7.88
CDY43337	Canola	cytosol	35.38	7.76
CDY45119	Canola	extracellular	35.38	7.22
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	6.67	6.22
CDY60712	Canola	endoplasmic reticulum	26.15	5.87
CDX90500	Canola	endoplasmic reticulum	26.15	5.87
CDY32270	Canola	cytosol, mitochondrion, plastid	21.54	5.33
CDY40516	Canola	cytosol	21.54	5.03
CDY67465	Canola	cytosol	3.08	2.15

Protein Annotations

EnsemblPlants:CDY36723	EnsemblPlantsGene:GSBRNA2T00062537001	Gene3D:3.30.30.30	GO:A0A078HIS1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323
PFAM:PF00012	PRINTS:PR00301	ProteinID:CDY36723	ProteinID:CDY36723.1	ScanProsite:PS00297	SUPFAM:SSF53067
UniParc:UPI0004EE6101	UniProt:A0A078HIS1	MapMan:35.1	:	:	:

Description

BnaC02g31440DBnaC02g31440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIS1]

Coordinates

chrLK032382:-:322290..323470

Molecular Weight (calculated)

21585.7 Da

IEP (calculated)

6.532

GRAVY (calculated)

-0.281

Length

195 amino acids

Sequence
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRIE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FSDASVQSDM KLWPFKIIPG
101: PADKPMIVVS YKGEEKQFAA EEISSMVLIK MREIAEAYLG VTIKNDVVTV PAYFNDSQRQ ATKDAGVIAG LNATSVGEKN YFRGESYCWR HPSWW

Best Arabidopsis Sequence Match ( AT1G56410.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDM KFWPFKVTPG
101: QADKPMIFVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG SSIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGIKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GDARALRRLR TACERAKRTL SSTAQTTVEV DSLFEGIDFY
301: SPITRAKFEE MNMDLFRKCM EPVMKCLRDS KMDKSMVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGIE TIGGVMTTLI QRNTTIPAKK EQEFTTTVDN QPDVLIQVYE GERARTIDNN ILGQFVLSGI PPAPRGIPQF TVCFDIDSNG ILNVSAEDKA
501: TGKKNKITIT NDKGRLSKDD IEKMVQEAEK YKSEDEEHKK KVEAKNGLEN YAYNVGNTLR DMGEKLPAAD KKKFEDSIEE VIQWLDDNQL AEADEFEHKM
601: KELESVWSTI ITKMYQG

Arabidopsis Description

HSP70-18Heat shock 70 kDa protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.