CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15421	Canola	cytosol	98.75	98.75
CDY10445	Canola	cytosol	98.75	98.75
CDY16796	Canola	cytosol	97.5	98.32
CDY53148	Canola	cytosol	94.58	88.67
CDX85038	Canola	cytosol	96.67	88.21
CDY16175	Canola	cytosol	93.33	87.16
CDY02235	Canola	cytosol	65.42	84.86
CDY36723	Canola	cytosol	65.0	80.0
CDX89754	Canola	plastid	65.42	70.09
GSMUA_Achr2P16250_001	Banana	cytosol	70.83	69.39
CDY04444	Canola	mitochondrion	51.67	69.27
CDY31804	Canola	cytosol	94.58	54.44
OQU92817	Sorghum	cytosol	61.25	49.16
KRH70478	Soybean	cytosol	44.58	38.08
CDY03437	Canola	cytosol	40.0	36.36
KRH01639	Soybean	cytosol	89.17	33.08
TraesCS6A01G342400.1	Wheat	cytosol	60.0	29.33
Zm00001d007706_P001	Maize	cytosol	37.08	26.25
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	21.67	24.88
CDY32364	Canola	cytosol	26.67	22.07
HORVU6Hr1G082550.1	Barley	cytosol	35.83	21.88
CDY32367	Canola	cytosol, mitochondrion, plastid	25.83	21.16
CDY12232	Canola	cytosol	27.5	11.72
CDY70083	Canola	cytosol	27.5	11.7
CDY67465	Canola	cytosol	12.92	11.11
CDX76065	Canola	cytosol	33.75	9.95
CDY49794	Canola	cytosol	31.25	9.86
CDX97975	Canola	cytosol	30.83	9.72
CDY24089	Canola	endoplasmic reticulum, extracellular	34.58	9.67
CDY43337	Canola	cytosol	33.75	9.11
CDY45119	Canola	extracellular	34.58	8.68
CDY32270	Canola	cytosol, mitochondrion, plastid	23.75	7.23
CDY60712	Canola	endoplasmic reticulum	25.42	7.02
CDX90500	Canola	endoplasmic reticulum	25.42	7.02
CDY40516	Canola	cytosol	23.75	6.83

Protein Annotations

EnsemblPlants:CDY40361	EnsemblPlantsGene:GSBRNA2T00069552001	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078HRN3
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	PFAM:PF00012	PRINTS:PR00301	ProteinID:CDY40361	ProteinID:CDY40361.1
ScanProsite:PS00329	SUPFAM:SSF53067	UniParc:UPI0004EE8B74	UniProt:A0A078HRN3	MapMan:35.1	:

Description

BnaA10g27070DBnaA10g27070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRN3]

Coordinates

chrLK032468:-:282203..283551

Molecular Weight (calculated)

26255.2 Da

IEP (calculated)

5.394

GRAVY (calculated)

-0.278

Length

240 amino acids

Sequence
(BLAST)

001: MSGKGEGPAI GIDLGTTTTP SYVAFTDSER LIGDAAKNQV AMNPINTVFD AKRLIGRRFS DSSVQSDMKL WPFKIIAGPA EKPMIVVNYK GEEKQFAAEE
101: ISSMVLIKMR EIAEAYLGVT IKNAVVTVPA YFNDSQRQAT KDAGVIAGLN ATSVGEKNVL IFDLGGGTFD VSLLTIEEGI FEVKATAGDT HLGGEDFDNR
201: MVNHFVQEFK RKSKKDITGN PRALRSEEDS FFHCSDHHRD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.