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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
plastid: 22908117
plastid: 26371478
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID: 26371478 doi
M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400077358 Potato cytosol 96.01 96.51
KRH77864 Soybean cytosol 76.39 77.06
Bra005610.1-P Field mustard cytosol 72.74 74.29
VIT_05s0020g03330.t01 Wine grape cytosol 74.65 74.27
CDY12232 Canola cytosol 72.57 74.25
CDY70083 Canola cytosol 72.22 73.76
AT2G32120.1 Thale cress cytosol 71.01 72.65
Os03t0218500-01 Rice cytosol 69.1 68.86
TraesCS4B01G243400.1 Wheat cytosol 68.58 68.1
TraesCS4D01G243000.1 Wheat cytosol 68.4 67.81
TraesCS4A01G066100.1 Wheat cytosol 68.23 67.29
Zm00001d048073_P001 Maize cytosol 67.36 67.13
GSMUA_Achr9P19260_001 Banana cytosol 68.4 67.01
EER92633 Sorghum plastid 67.36 60.72
Solyc02g080470.2.1 Tomato cytosol 19.44 14.87
Solyc12g043120.1.1 Tomato extracellular 21.18 14.42
Solyc12g043110.1.1 Tomato plastid 20.49 13.85
Solyc07g043560.2.1 Tomato plastid 18.75 12.13
Protein Annotations
MapMan:19.1.5.1Gene3D:2.60.34.10Gene3D:3.30.30.30Gene3D:3.30.420.40Gene3D:3.90.640.10GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0006950GO:GO:0008150GO:GO:0009408
GO:GO:0009628GO:GO:0009644GO:GO:0042542InterPro:HSP70_peptide-bd_sfInterPro:Hsp_70_famInterPro:IPR029047
UniProt:K4CVH2PFAM:PF00012PRINTS:PR00301PANTHER:PTHR19375PANTHER:PTHR19375:SF101SUPFAM:SSF100920
SUPFAM:SSF53067EnsemblPlantsGene:Solyc09g075950.1EnsemblPlants:Solyc09g075950.1.1UniParc:UPI000276BD6DSEG:seg:
Description
No Description!
Coordinates
chr9:+:67581791..67583521
Molecular Weight (calculated)
62726.9 Da
IEP (calculated)
5.712
GRAVY (calculated)
0.029
Length
576 amino acids
Sequence
(BLAST)
001: MAEQAYTVVS DSETTGEEKT SSSFPEIAIG IDIGTSQCSV AVWSGSQVEL VRNTRNRKLM KSYVTFKDEV PAGGVSDELA HEYDMLSGAA IFNMKRLIGR
101: VDTDPVVHAS KSLPFLVETL NIGVRPFIAA LVNNMWRSTT PEEVLAIFLV ELRAMAEVKL KRPVRNVVLT VPVSFSRFQL TRIERACAMA GLHVLRLMPE
201: PTAVALLYAQ QQQQSGHENM GSGSEKIALI FNMGAGYCDV AITATAGGVS QIKALAGSTV GGEDLLQNLM HHLLPNMDDL FSSHGIEEIK RMGLLRVATQ
301: NAIHLLSFDE SVPIDVDLGN GTKLSKVLTR TELEEVNKEV FEKCEALIKR CLQAAKLEAE DVHDVIIVGG CSYVPKVRNI VMSICKRQEL YSGMNPLEAA
401: VRGAALEGAV ASGISDPFGN LDLLTIQATP LSIGIQADGG DFVPVIHQNT TTPVRKEQIF TTVHDDQAEA LILVYEGDEK AAEHNHLLGY FKIRGIPPAQ
501: KGVPEISVCM DIDASNVLRV FAGVIVHGTQ RAPMPFMEVR MPTVDDGHGW SAQALHKMYG STLDLVTVKK IQHRDC
Best Arabidopsis Sequence Match ( AT2G32120.1 )
(BLAST)
001: MAEAAYTVAS DSENTGEEKS SSSPSLPEIA LGIDIGTSQC SIAVWNGSQV HILRNTRNQK LIKSFVTFKD EVPAGGVSNQ LAHEQEMLTG AAIFNMKRLV
101: GRVDTDPVVH ASKNLPFLVQ TLDIGVRPFI AALVNNAWRS TTPEEVLAIF LVELRLMAEA QLKRPVRNVV LTVPVSFSRF QLTRFERACA MAGLHVLRLM
201: PEPTAIALLY AQQQQMTTHD NMGSGSERLA VIFNMGAGYC DVAVTATAGG VSQIKALAGS PIGGEDILQN TIRHIAPPNE EASGLLRVAA QDAIHRLTDQ
301: ENVQIEVDLG NGNKISKVLD RLEFEEVNQK VFEECERLVV QCLRDARVNG GDIDDLIMVG GCSYIPKVRT IIKNVCKKDE IYKGVNPLEA AVRGAALEGA
401: VTSGIHDPFG SLDLLTIQAT PLAVGVRANG NKFIPVIPRN TMVPARKDLF FTTVQDNQKE ALIIIYEGEG ETVEENHLLG YFKLVGIPPA PKGVPEINVC
501: MDIDASNALR VFAAVLMPGS SSPVVPVIEV RMPTVDDGHG WCAQALNVKY GATLDLITLQ RKM
Arabidopsis Description
HSP70-8Heat shock 70 kDa protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKY8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.