Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G108000.1 | Wheat | endoplasmic reticulum | 45.76 | 25.39 |
| Os12t0569700-03 | Rice | endoplasmic reticulum, mitochondrion | 14.12 | 23.92 |
| PGSC0003DMT400050462 | Potato | cytosol | 27.4 | 19.13 |
| Os04t0211700-00 | Rice | cytosol | 18.08 | 16.98 |
| TraesCS2A01G107900.1 | Wheat | vacuole | 20.62 | 16.9 |
| Os03t0218500-01 | Rice | cytosol | 23.16 | 14.19 |
| Os01t0688900-00 | Rice | cytosol | 20.06 | 14.12 |
| Os06t0679800-00 | Rice | plasma membrane | 16.67 | 11.11 |
| Os05t0591400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion | 13.56 | 10.98 |
| Os06t0212900-01 | Rice | endoplasmic reticulum | 14.41 | 10.85 |
| Os01t0180800-01 | Rice | plasma membrane | 20.34 | 8.52 |
| Os05t0181000-01 | Rice | plasma membrane | 20.06 | 8.32 |
Protein Annotations
| Gene3D:1.20.1270.10 | Gene3D:2.60.34.10 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | MapMan:35.1 | UniProt:A0A0N7KD24 |
| ProteinID:BAS72425.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:HSP70_C_sf |
| InterPro:HSP70_peptide-bd_sf | InterPro:Hsp_70_fam | InterPro:IPR029047 | InterPro:IPR029048 | EnsemblPlantsGene:Os01g0517900 | EnsemblPlants:Os01t0517900-00 |
| PFAM:PF00012 | PRINTS:PR00301 | PANTHER:PTHR19375 | PANTHER:PTHR19375:SF317 | SUPFAM:SSF100920 | SUPFAM:SSF100934 |
| SUPFAM:SSF53067 | UniParc:UPI0003939B67 | SEG:seg | : | : | : |
Description
Similar to Luminal binding protein. (Os01t0517900-00)
Coordinates
chr1:+:18370910..18372056
Molecular Weight (calculated)
39157.3 Da
IEP (calculated)
4.902
GRAVY (calculated)
-0.457
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: ERAKHALSAQ HQVRVEIEAL LDGGVDLSET LTRAQFEELN DDLFARTMAP LRKTMADAGL EKGDINEIIH VGGSTRIPKV QQLIRDYFDG KKEIVKVNNP
101: DETVAYGAAV IGRHVAGDDD DKPTMLGNLL ISLYTISIET AGGAVTPMIP RRSRLPAERT HVFTTYLGRQ TAVAINVFQG EGSTAKDNTL FGRLVLTGIP
201: PASVWNWGWR WRPIQVTVKV DELGDIHVEA TDKGGSGKSE RLSIVSGEGH EHGRLSKEEI DRMIREVAED LVEEERIVKE RVDALNMLET YIVKNTAVTG
301: GETDCEAKAR AASEWLDGNP AAEKEDYEEK LKELEDACGP VHGGRARDIW TWPR
101: DETVAYGAAV IGRHVAGDDD DKPTMLGNLL ISLYTISIET AGGAVTPMIP RRSRLPAERT HVFTTYLGRQ TAVAINVFQG EGSTAKDNTL FGRLVLTGIP
201: PASVWNWGWR WRPIQVTVKV DELGDIHVEA TDKGGSGKSE RLSIVSGEGH EHGRLSKEEI DRMIREVAED LVEEERIVKE RVDALNMLET YIVKNTAVTG
301: GETDCEAKAR AASEWLDGNP AAEKEDYEEK LKELEDACGP VHGGRARDIW TWPR
001: MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
Arabidopsis Description
MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.