Factsheet for Os06t0212900-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

endoplasmic reticulum: 22984070

gfp PMID: 22984070 doi

J Yang, X Zhao, K Cheng, H Du, Y Ouyang, J Chen, S Qiu, J Huang, Y Jiang, L Jiang, J Ding, J Wang, C Xu, X Li, Q Zhang

National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University, Wuhan 430070, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18790	Sorghum	endoplasmic reticulum, extracellular, golgi	53.62	56.76
Zm00001d025556_P001	Maize	endoplasmic reticulum, golgi	50.0	49.58
Os05t0591400-01	Rice	endoplasmic reticulum, golgi, mitochondrion	45.11	48.51
Zm00001d025565_P001	Maize	golgi	43.4	48.34
Zm00001d025561_P002	Maize	golgi	42.77	47.18
Zm00001d026467_P001	Maize	cytosol	27.02	38.48
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	13.62	30.62
Os01t0688900-00	Rice	cytosol	25.74	24.06
Os03t0218500-01	Rice	cytosol	18.09	14.71
Os01t0517900-00	Rice	cytosol	10.85	14.41
Os01t0180800-01	Rice	plasma membrane	19.36	10.77
Os05t0181000-01	Rice	plasma membrane	18.94	10.43
Os04t0211700-00	Rice	cytosol	7.87	9.81
Os06t0679800-00	Rice	plasma membrane	9.57	8.47

Protein Annotations

Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EntrezGene:4340470	ProteinID:AFS33435.1	EMBL:AK071518
EMBL:AK104048	ProteinID:BAD35186.1	ProteinID:BAD35727.1	ProteinID:BAF19040.1	ProteinID:BAS96754.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Hsp_70_fam	EnsemblPlantsGene:Os06g0212900	EnsemblPlants:Os06t0212900-01
PFAM:PF00012	PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF201	UniProt:Q69TV0	SUPFAM:SSF53067
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00004036E4	RefSeq:XP_015642184.1	SEG:seg	:

Description

Heat shock protein Hsp70 family protein. (Os06t0212900-01)

Coordinates

chr6:-:5745188..5747209

Molecular Weight (calculated)

50534.7 Da

IEP (calculated)

7.143

GRAVY (calculated)

0.026

Length

470 amino acids

Sequence
(BLAST)

001: MGRRRLLLSD LLLLLLIAIA VAGAAAAIAI PRAAPAFGVE TGWPPEHCLR CFAPPDAPFV LGAAAAIHLG NTNSCIAGYD DDDAPLGAKR SYYQFCIPSW
101: VALAHDNGTV ISGEAAMNRA ALSPSTAVSA FMRLLHRRVE DDVVKREIEL VPYKFTKMLG WVSVQLDTDA EFSVDHLAGI LISHLKHTAE AHLGRHINNA
201: VITLPSRLSY SADGRQVLSS AAKEYSGFRA VKVVDEHIAA AAAYGHHTKQ GDRKAILVFH LGGRTSHATI FKFVDGTARL IATRAHHFLG GDDFTARIVD
301: HMVEHIKEQH GRDVRQEEKA MVRLRVACEH AKKALSEQQE TLVQMDSLLD DGAVFSATLT RAKFEELNHD LLDRAMALVK EVVVTTGGVE VVDEVLVVGG
401: SARIPKVRQL VKDYFNGNGN GTHPNSRGCK GPVDVEPEDA VLHGAALLSR PLPVAEGTAA ARSIGSVGGI

Best Arabidopsis Sequence Match ( AT1G09080.2 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA AKNQAAKNPE
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.