Factsheet for Zm00001d025561_P002

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025565_P001	Maize	golgi	79.11	79.86
Zm00001d025556_P001	Maize	endoplasmic reticulum, golgi	83.1	74.68
EES18790	Sorghum	endoplasmic reticulum, extracellular, golgi	53.76	51.58
Zm00001d026467_P001	Maize	cytosol	39.67	51.21
Os06t0212900-01	Rice	endoplasmic reticulum	47.18	42.77
Zm00001d007706_P001	Maize	cytosol	18.54	23.3
Zm00001d025053_P001	Maize	cytosol	9.15	16.32
Zm00001d048458_P006	Maize	cytosol	8.92	15.9
Zm00001d048073_P001	Maize	cytosol	15.96	11.76
Zm00001d036571_P002	Maize	cytosol	16.2	9.16
Zm00001d014358_P014	Maize	cytosol	15.96	9.05
Zm00001d009948_P004	Maize	cytosol	17.37	8.88
Zm00001d037700_P002	Maize	cytosol	17.14	8.68
Zm00001d051607_P004	Maize	endoplasmic reticulum	18.08	8.57
Zm00001d037717_P002	Maize	plastid	16.9	8.54
Zm00001d009950_P002	Maize	cytosol	17.14	8.5
Zm00001d017809_P002	Maize	plasma membrane	18.08	8.31
Zm00001d009828_P001	Maize	cytosol	0.47	1.57
Zm00001d051609_P004	Maize	cytosol	1.64	1.5

Protein Annotations

EnsemblPlants:Zm00001d025561_P002	EnsemblPlants:Zm00001d025561_T002	EnsemblPlantsGene:Zm00001d025561	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Hsp_70_fam	ncoils:Coil	PANTHER:PTHR19375
PANTHER:PTHR19375:SF201	PFAM:PF00012	PRINTS:PR00301	ProteinID:AQK43973.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI000843C561	UniProt:A0A1D6J7S4	MapMan:35.1	:

Description

Luminal-binding protein 2

Coordinates

chr10:-:122373261..122374905

Molecular Weight (calculated)

47433.8 Da

IEP (calculated)

6.844

GRAVY (calculated)

-0.256

Length

426 amino acids

Sequence
(BLAST)

001: MDTMMGRRLP VSLVPLLMVV MVAAAAFDIS RASAAAAFNI SRAPPAFGVR RGAPKEYCEW RGPWGTAPFL LGSAAAIHLG NTNSCIAAYD FRPGSHEYYQ
101: LYMPSWVAVT DNGTVLSDEA AMNHATVSPG TAISGFTHIL DQKLKDEVVK SEMKLSPPYK LSERDGVEAH LGRELSAAVI AVSRHLNYNG RQDIVNVGRY
201: DAGFRRAAKA IDRQITAAVA YHHHTEQVLA CWHAIVGDDF TARIVDYMAE LIKEKNQWDI RQDAEALRRL RVACEHAKKA LSDQEETMVQ IHVAGIESSA
301: LLTRAKLEEL NQDMLDRVMG LVDGALMGTR SGWLTRPRDE SRKDMVDEIV LIGGDARMPK LRQLVEDYFH GKWPNSRKGV EPEDAIVQGT VILSRPKAAR
401: YLEECFDYLY GKDDRGQPSF VFRTLD

Best Arabidopsis Sequence Match ( AT5G42020.2 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE KIDARNALET YVYNMKNQVS DKDKLADKLE GDEKEKIEAA TKEALEWLDE NQNSEKEEYD EKLKEVEAVC NPIITAVYQR SGGAPGAGGE
601: SSTEEEDESH DEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.