Factsheet for Zm00001d025565_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025561_P002	Maize	golgi	79.86	79.11
Zm00001d025556_P001	Maize	endoplasmic reticulum, golgi	85.31	75.95
EES18790	Sorghum	endoplasmic reticulum, extracellular, golgi	52.84	50.23
Zm00001d026467_P001	Maize	cytosol	39.1	50.0
Os06t0212900-01	Rice	endoplasmic reticulum	48.34	43.4
Zm00001d007706_P001	Maize	cytosol	18.25	22.71
Zm00001d025053_P001	Maize	cytosol	9.48	16.74
Zm00001d048458_P006	Maize	cytosol	9.24	16.32
Zm00001d048073_P001	Maize	cytosol	16.59	12.11
Zm00001d036571_P002	Maize	cytosol	18.48	10.36
Zm00001d014358_P014	Maize	cytosol	18.01	10.12
Zm00001d009950_P002	Maize	cytosol	19.19	9.43
Zm00001d037717_P002	Maize	plastid	18.72	9.37
Zm00001d009948_P004	Maize	cytosol	18.48	9.36
Zm00001d037700_P002	Maize	cytosol	18.48	9.27
Zm00001d051607_P004	Maize	endoplasmic reticulum	17.77	8.34
Zm00001d017809_P002	Maize	plasma membrane	17.77	8.09
Zm00001d009828_P001	Maize	cytosol	0.47	1.57
Zm00001d051609_P004	Maize	cytosol	1.66	1.5

Protein Annotations

Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	UniProt:A0A1D6J7S6	ProteinID:AQK43975.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Heat_shock_70_CS
InterPro:Hsp_70_fam	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF201
SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000843E844	EnsemblPlantsGene:Zm00001d025565	EnsemblPlants:Zm00001d025565_P001
EnsemblPlants:Zm00001d025565_T001	SEG:seg	:	:	:	:

Description

Luminal-binding protein 2

Coordinates

chr10:-:122475812..122478060

Molecular Weight (calculated)

46906.4 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.212

Length

422 amino acids

Sequence
(BLAST)

001: MDTMMGRRLL VSLVPLLMAV MVAAAFDISR GPPAFGVRRG APKEYCDWRG PWGAAPFLLG SAAAIHLGNT NSCIAAYNFR TWSHEYYQLC MPSWVAVTDN
101: GTVLSGEAAM NHATIGPRTA ISGFTRLLDQ KLTDDVGKSE MKLSPPYKFS ERAGPVAMQF NHPSRRGQVI EFSPVDLAVV LVSELKHRAE AHLGRELSAA
201: VIAMPRHLNY NERHDIVNCT TTIVLACWHA IAGDDFTARI VDYMAELIKE KHQWDIRQDA EALRRLRVAY EHAKKALSDQ EETMVQIHVA GIESSAPLTR
301: AKLEELNQDL LDRVMGLVDG AVMGTGSGWL TQPRDESRKD MVDEIVLVGG GTRMPKLRQL VEDYFHGRRP NSRKGVEPED AIVRGTAILS CPKAAHYLEE
401: CFDYLYGKDG RGLPSFIFRT PD

Best Arabidopsis Sequence Match ( AT5G28540.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFALSSAIEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRVME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDFSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLNGIPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVNDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GGAGGESSTE EEDESHDEL

Arabidopsis Description

MED37AMediator of RNA polymerase II transcription subunit 37a [Source:UniProtKB/Swiss-Prot;Acc:Q9LKR3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.