Factsheet for Os05t0591400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G084180.1	Barley	cytosol	24.26	57.61
TraesCS4B01G342600.1	Wheat	endoplasmic reticulum	47.6	50.0
TraesCS5A01G511800.1	Wheat	endoplasmic reticulum	40.96	49.58
TraesCS5A01G511700.1	Wheat	endoplasmic reticulum, golgi	50.8	49.12
TraesCS4D01G338300.1	Wheat	endoplasmic reticulum	50.8	49.12
TraesCS4D01G338600.1	Wheat	endoplasmic reticulum, golgi	51.03	48.9
TraesCS7D01G455000.1	Wheat	endoplasmic reticulum, golgi	48.05	47.3
TraesCS7B01G369100.1	Wheat	endoplasmic reticulum	46.45	47.21
HORVU4Hr1G084190.1	Barley	endoplasmic reticulum, extracellular	12.59	45.45
Os06t0212900-01	Rice	endoplasmic reticulum	48.51	45.11
TraesCS7D01G455300.2	Wheat	endoplasmic reticulum, plasma membrane	26.54	44.44
HORVU4Hr1G084200.1	Barley	extracellular, golgi	12.59	42.97
HORVU7Hr1G107190.2	Barley	cytosol, mitochondrion	38.22	36.78
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	13.96	29.19
Os01t0688900-00	Rice	cytosol	28.15	24.45
Os03t0218500-01	Rice	cytosol	19.68	14.88
Os01t0517900-00	Rice	cytosol	10.98	13.56
Os04t0211700-00	Rice	cytosol	8.92	10.34
Os01t0180800-01	Rice	plasma membrane	19.91	10.3
Os05t0181000-01	Rice	plasma membrane	19.45	9.96
Os06t0679800-00	Rice	plasma membrane	11.21	9.23

Protein Annotations

Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EntrezGene:4339788	ProteinID:AAT44294.1	ProteinID:AAT58822.1
ProteinID:BAF18403.1	ProteinID:BAS95620.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	EnsemblPlantsGene:Os05g0591400	EnsemblPlants:Os05t0591400-01	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF201	UniProt:Q6L4S6	SUPFAM:SSF53067
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00003A928A	RefSeq:XP_015639086.1	SEG:seg	:

Description

enhancing biomass and spikelet numberControl of plant biomass and spikelet number (Os05t0591400-01)

Coordinates

chr5:+:29455559..29457153

Molecular Weight (calculated)

47346.3 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.135

Length

437 amino acids

Sequence
(BLAST)

001: MARRRLVLLL LIIAAAGAAA FGIRRDAPKA YCFYGIEWTG VPYLPGTAAA IYIGNTNSCI AGYHSPPDTA TSYRFCIPSW VAFTANATTL CGQPAVDHSA
101: AISGFKRLIG LQPGDPHAKR VAQIAPYKLG EKIGRCSIQV QLDDGAKCRV EDFLPEDVAG ILIAHLKSTA EAHLGHRIDN AVVTVPGHFN GNQRQEVSSG
201: STEYGGFRYV SVVDEQVAAA AAHGLHEDRG DGKVILVFHL GGRTAHATKF VIRDGTPSLI ALRHDPFLGG DDFTARVVDH MADLIKDKHG GRDVRADAAA
301: LRRLTAECER AKKALSYQQE TVVTMRLDDD DDLFSEPLTR SKLEELIGDL VGRAVDLVES CDASGGDVVG VDEILLVGGS TRIPMVRDLV KDYFHGKEAS
401: NEKGVEPDEA VIRGALLLSH PHQARYLDPC YDYWHSR

Best Arabidopsis Sequence Match ( AT1G09080.2 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA AKNQAAKNPE
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.