Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P23790_001 | Banana | mitochondrion | 62.79 | 69.49 |
| TraesCS7D01G228600.1 | Wheat | mitochondrion | 43.52 | 50.0 |
| TraesCS7A01G225900.1 | Wheat | mitochondrion | 43.85 | 49.62 |
| Os06t0326500-01 | Rice | mitochondrion | 44.19 | 49.44 |
| TraesCS7B01G193700.1 | Wheat | mitochondrion | 43.52 | 49.25 |
| HORVU7Hr1G046980.1 | Barley | mitochondrion | 42.86 | 49.24 |
| EER88336 | Sorghum | mitochondrion | 39.2 | 44.53 |
| Zm00001d045926_P002 | Maize | mitochondrion | 37.87 | 43.35 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 34.88 | 39.92 |
| GSMUA_Achr10P... | Banana | mitochondrion | 20.6 | 28.84 |
| GSMUA_Achr5P22820_001 | Banana | mitochondrion | 20.93 | 27.75 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP18470_001 | EnsemblPlants:GSMUA_AchrUn_randomT18470_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG18470_001 | Gene3D:3.10.280.10 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 |
| InterPro:MAM33_sf | PANTHER:PTHR10826 | PANTHER:PTHR10826:SF12 | PFAM:PF02330 | SEG:seg | SUPFAM:SSF54529 |
| UniParc:UPI000295B315 | UniProt:M0UAA6 | MapMan:35.1 | : | : | : |
Description
Putative Uncharacterized protein At2g39795, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18470_001]
Coordinates
chrchrUn_random:+:88395053..88397743
Molecular Weight (calculated)
34159.1 Da
IEP (calculated)
4.382
GRAVY (calculated)
-0.441
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIYTPRCDP FTAFYIRCSQ SFIVKRPVAS LNPWLLNPNM TAVSLLRRSL RLHLSPALFR RHGRSLFTSS PLAASSALSL SPSHGAIPRG LRPPSSLLFP
101: RFASSNISGD ENLKRVIDSE IQCARELDNH GQEVDVPENF PFEIVDSPGD QAVFLKREFA GENIQVTVLM NFDEQDDMEE NDEDDGDDES NESSMEPSVS
201: LVVTIEKGES SLLEFCCNLN AHELEIESMV IKKRDDPDDQ GAYQGPEFSD LDENLQKALH KYLEVRGIES SLFDFLHEYM LAKDEREYLT WLKNMKEFVA
301: K
101: RFASSNISGD ENLKRVIDSE IQCARELDNH GQEVDVPENF PFEIVDSPGD QAVFLKREFA GENIQVTVLM NFDEQDDMEE NDEDDGDDES NESSMEPSVS
201: LVVTIEKGES SLLEFCCNLN AHELEIESMV IKKRDDPDDQ GAYQGPEFSD LDENLQKALH KYLEVRGIES SLFDFLHEYM LAKDEREYLT WLKNMKEFVA
301: K
001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
Arabidopsis Description
At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.