CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045926_P002	Maize	mitochondrion	86.04	86.69
TraesCS7D01G228600.1	Wheat	mitochondrion	71.7	72.52
TraesCS7B01G193700.1	Wheat	mitochondrion	71.32	71.05
TraesCS7A01G225900.1	Wheat	mitochondrion	69.81	69.55
HORVU7Hr1G046980.1	Barley	mitochondrion	68.68	69.47
Os06t0326500-01	Rice	mitochondrion	70.19	69.14
GSMUA_Achr5P23790_001	Banana	mitochondrion	44.91	43.75
GSMUA_AchrUn_...	Banana	cytosol	44.53	39.2
EES00334	Sorghum	mitochondrion, plastid	29.06	28.95
EES19636	Sorghum	mitochondrion	25.66	26.56
EES00333	Sorghum	plastid	26.79	26.1
EES15053	Sorghum	mitochondrion	20.75	23.81
KXG36169	Sorghum	mitochondrion	18.49	20.76

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	EntrezGene:8078270	UniProt:C5Z1R8	EnsemblPlants:EER88336	ProteinID:EER88336
ProteinID:EER88336.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826
PANTHER:PTHR10826:SF12	EnsemblPlantsGene:SORBI_3010G134100	SUPFAM:SSF54529	unigene:Sbi.8277	UniParc:UPI0001A88FAD	RefSeq:XP_002436969.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:19518837..19523184

Molecular Weight (calculated)

29831.7 Da

IEP (calculated)

4.458

GRAVY (calculated)

-0.612

Length

265 amino acids

Sequence
(BLAST)

001: MSPASLAARL LRRAATTSSS PLSALARRGI RSSAPVPLPR RLPAATSSSA GTTARRFLAS QSPASSSSSK SSADENLRRV IESEIECVVQ SEESTADKHI
101: DLPDDFPFEI IDNPGDQTIT LQREIAGETI KAAIYTNFDT EEDLDDEDDK SDKDEESFKP AIQMVITIQK PEGPILEFDC NFNDDELAIE NMRVVNRDNP
201: DAENVYEGPR FPVLDESLQK ALHRYLEVRG FKHSLHDWLY EYMMRKDEKE YVVWLKNMKE FIGAN

Best Arabidopsis Sequence Match ( AT5G02050.1 )
(BLAST)

001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK

Arabidopsis Description

At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.