CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89430
EER89431
KXG19616
OQU75612
OQU75930
OQU76071
OQU85385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	EER89430	AT4G25200.1	21798944
AT5G02050.1	EER89431	AT4G25200.1	21798944
AT5G02050.1	KXG19616	AT4G25200.1	21798944
AT5G02050.1	OQU75612	AT4G25200.1	21798944
AT5G02050.1	OQU75930	AT4G25200.1	21798944
AT5G02050.1	OQU76071	AT4G25200.1	21798944
AT5G02050.1	OQU85385	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0456000-01	Rice	mitochondrion	62.11	61.63
HORVU1Hr1G072660.2	Barley	mitochondrion	59.77	59.77
TraesCS1D01G281100.1	Wheat	mitochondrion	58.2	59.13
TraesCS1B01G291000.1	Wheat	mitochondrion	57.42	56.54
GSMUA_Achr4P16890_001	Banana	mitochondrion	37.11	36.12
EES00334	Sorghum	mitochondrion, plastid	36.33	34.96
KRH15056	Soybean	mitochondrion	32.81	33.2
PGSC0003DMT400055876	Potato	mitochondrion, plastid	32.42	32.55
KRH73081	Soybean	mitochondrion	32.03	32.41
VIT_13s0019g02350.t01	Wine grape	mitochondrion	31.64	32.02
Solyc03g079930.2.1	Tomato	plastid	32.03	31.78
KRH00042	Soybean	nucleus	30.08	30.32
KRH49169	Soybean	endoplasmic reticulum	29.69	30.04
Bra005013.1-P	Field mustard	mitochondrion	28.52	29.44
CDX74831	Canola	mitochondrion	28.52	29.32
CDY20481	Canola	mitochondrion	28.12	29.03
AT2G39795.1	Thale cress	mitochondrion	28.12	28.8
AT5G02050.1	Thale cress	mitochondrion, plastid	29.69	28.46
CDX70103	Canola	mitochondrion	27.73	27.84
Bra009157.1-P	Field mustard	mitochondrion	26.95	27.49
Bra014733.1-P	Field mustard	mitochondrion	27.73	27.41
CDX98894	Canola	mitochondrion	27.34	27.13
AT3G55605.1	Thale cress	mitochondrion	27.34	27.13
CDY11346	Canola	mitochondrion	27.34	26.82
CDY38743	Canola	cytosol	16.02	26.8
CDY65769	Canola	mitochondrion, plastid	26.95	26.64
CDX76083	Canola	mitochondrion	26.95	26.54
AT5G05990.1	Thale cress	mitochondrion	26.56	26.25
CDY55117	Canola	mitochondrion, plastid	26.56	26.25
Bra005705.1-P	Field mustard	mitochondrion, plastid	26.56	26.25
CDX80981	Canola	mitochondrion	26.56	26.25
CDX80800	Canola	mitochondrion	26.56	26.25
Bra005873.1-P	Field mustard	mitochondrion	26.56	26.05
EER88336	Sorghum	mitochondrion	26.56	25.66
PGSC0003DMT400022948	Potato	mitochondrion	24.61	25.1
Solyc09g011250.2.1	Tomato	mitochondrion	24.22	24.7
EES00333	Sorghum	plastid	25.39	23.9
Bra029081.1-P	Field mustard	plastid	21.09	23.58
AT2G39790.1	Thale cress	mitochondrion, plastid	21.88	23.33
CDY47064	Canola	plastid	21.88	22.76
KXG36169	Sorghum	mitochondrion	20.7	22.46
CDY70180	Canola	plastid	22.66	22.39
CDY70179	Canola	plastid	21.48	22.36
CDY38740	Canola	plastid	21.09	22.31
Bra029051.1-P	Field mustard	plastid	22.66	22.14
CDY43065	Canola	plastid	22.66	22.14
Bra029050.1-P	Field mustard	plastid	21.09	21.95
CDY43064	Canola	plastid	21.09	21.95
EES15053	Sorghum	mitochondrion	19.14	21.21
CDY47065	Canola	plastid	11.33	20.57
Bra029083.1-P	Field mustard	mitochondrion	14.84	20.0
Bra029082.1-P	Field mustard	plastid	11.33	17.68

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	EntrezGene:8072536	UniProt:C5YZ74	EnsemblPlants:EES19636	ProteinID:EES19636
ProteinID:EES19636.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826
PANTHER:PTHR10826:SF10	EnsemblPlantsGene:SORBI_3009G160700	SUPFAM:SSF54529	UniParc:UPI0001A89562	RefSeq:XP_002441206.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:51812312..51813798

Molecular Weight (calculated)

28637.9 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.478

Length

256 amino acids

Sequence
(BLAST)

001: MATSAALRRA PWAAAARGLL GAMSGSRVPP PRRLPYRAER SAALSSLSDP QPGAAADAHL LRVINYEISC AQQDCKKRDW AKELGEWFPF EIQDKEGTTR
101: IILTRRDQKE QIEVEVFLPS PAEPVEHNGE QKDGTKDDNS QAHAINGAAN RYYIPLLVKI HKGMASWLEI SCRSYPDELA IESLAFGPTD ESVDSSNVEA
201: KISNLPEELQ HAFYAYLKSR AISSDVTNFL HAYMINKECH EYLAWLRKLK GLIKSK

Best Arabidopsis Sequence Match ( AT2G39795.1 )
(BLAST)

001: MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ

Arabidopsis Description

Uncharacterized protein At2g39795, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W487]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.