CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70103	Canola	mitochondrion	85.33	86.67
CDX98894	Canola	mitochondrion	85.71	86.05
CDY11346	Canola	mitochondrion	86.49	85.82
AT5G05990.1	Thale cress	mitochondrion	78.38	78.38
HORVU0Hr1G006190.1	Barley	cytosol	35.14	51.12
HORVU3Hr1G011460.1	Barley	mitochondrion	44.4	45.28
VIT_13s0019g02350.t01	Wine grape	mitochondrion	44.02	45.06
Solyc03g079930.2.1	Tomato	plastid	44.79	44.96
TraesCS3B01G071700.1	Wheat	mitochondrion	44.02	44.02
TraesCS3A01G059200.1	Wheat	mitochondrion	44.02	44.02
Zm00001d039883_P001	Maize	mitochondrion	42.47	43.48
EES00334	Sorghum	mitochondrion, plastid	44.4	43.23
Os01t0143300-01	Rice	mitochondrion	44.02	43.18
PGSC0003DMT400055876	Potato	mitochondrion, plastid	42.47	43.14
GSMUA_Achr4P16890_001	Banana	mitochondrion	43.24	42.59
CDY20481	Canola	mitochondrion	39.77	41.53
CDX74831	Canola	mitochondrion	39.77	41.37
KRH73081	Soybean	mitochondrion	39.77	40.71
CDX76083	Canola	mitochondrion	40.15	40.0
CDY65769	Canola	mitochondrion, plastid	39.77	39.77
KRH15056	Soybean	mitochondrion	38.61	39.53
HORVU3Hr1G011490.1	Barley	cytosol	18.92	36.84
HORVU3Hr1G085260.1	Barley	cytosol	22.39	36.71
Os01t0143700-00	Rice	mitochondrion	33.98	33.98
CDY55117	Canola	mitochondrion, plastid	33.98	33.98
CDX80800	Canola	mitochondrion	33.59	33.59
CDY38743	Canola	cytosol	18.92	32.03
Os01t0143800-01	Rice	plastid	31.66	29.82
TraesCS1D01G281100.1	Wheat	mitochondrion	28.19	28.97
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	31.27	28.93
HORVU1Hr1G072660.2	Barley	mitochondrion	28.19	28.52
CDY47064	Canola	plastid	27.03	28.46
EES00333	Sorghum	plastid	29.73	28.31
Zm00001d008610_P001	Maize	plastid	29.73	28.1
CDY38740	Canola	plastid	25.87	27.69
TraesCS1B01G291000.1	Wheat	mitochondrion	27.41	27.31
CDX68804	Canola	cytosol	12.36	26.89
CDY70180	Canola	plastid	26.64	26.64
EES19636	Sorghum	mitochondrion	26.25	26.56
TraesCS3B01G072000.1	Wheat	mitochondrion	27.41	26.3
TraesCS3A01G059600.1	Wheat	plastid	27.41	26.1
TraesCS3D01G059700.1	Wheat	mitochondrion	27.41	25.27
CDY43065	Canola	plastid	25.48	25.19
TraesCS3B01G072200.1	Wheat	plastid	26.25	25.19
TraesCS3D01G059800.1	Wheat	mitochondrion	28.57	25.17
TraesCS3D01G059900.1	Wheat	plastid	25.87	24.81
CDY39948	Canola	mitochondrion	23.17	24.79
CDY33373	Canola	mitochondrion	23.17	24.69
HORVU3Hr1G011560.1	Barley	plastid	27.41	24.65
CDX87337	Canola	mitochondrion	22.78	24.38
CDY35045	Canola	mitochondrion	22.78	24.38
CDY47065	Canola	plastid	13.13	24.11
Os05t0456000-01	Rice	mitochondrion	23.55	23.64
CDY43064	Canola	plastid	22.39	23.58
CDY70179	Canola	plastid	22.01	23.17
CDY13466	Canola	mitochondrion	21.24	22.45
CDX72338	Canola	plastid	21.24	22.0
TraesCS3B01G071900.1	Wheat	mitochondrion	26.25	21.94
TraesCS3D01G059500.1	Wheat	mitochondrion	25.48	21.29
TraesCS3D01G059600.1	Wheat	mitochondrion	23.17	20.69
HORVU3Hr1G011580.1	Barley	mitochondrion	12.74	20.12
HORVU3Hr1G011510.1	Barley	plastid	25.48	16.3

Protein Annotations

EnsemblPlants:CDX80981	EnsemblPlantsGene:GSBRNA2T00134410001	Gene3D:3.10.280.10	GO:A0A078CV04	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	ProteinID:CDX80981	ProteinID:CDX80981.1
SEG:seg	SUPFAM:SSF54529	UniParc:UPI0004EE0670	MapMan:35.1	:	:

Description

BnaC03g02350D

Coordinates

chrLK031823:-:1133156..1134122

Molecular Weight (calculated)

29738.0 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.661

Length

259 amino acids

Sequence
(BLAST)

001: MATLVRRTAS RLVGSCFKNS FPVNPSLDQS CYALGSLRYL TPSISRDNPF TTSARKRASS TDSLLRVIET EIGFAEQADD YDRVEETPSG FRFKMEEKPG
101: TKIVTLTRDY QGESVVVEVH MTNLVTGDKG DDEEESDEEE EEEHEDKPEK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDK IVIKDMWFTF PDDPSKDELA
201: YEGPSFRVWD EKLRTAFHRY NEIRGIAPSM INFLHEYMIN KDSKEHLLWL KTLKNFVKC

Best Arabidopsis Sequence Match ( AT5G05990.1 )
(BLAST)

001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY

Arabidopsis Description

AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.