CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39948	Canola	mitochondrion	97.11	97.11
Bra035158.1-P	Field mustard	mitochondrion	95.87	95.87
AT1G80720.2	Thale cress	mitochondrion	82.23	82.23
CDY33373	Canola	mitochondrion	67.36	67.08
CDY35045	Canola	mitochondrion	65.29	65.29
VIT_09s0002g09050.t01	Wine grape	cytosol	43.39	54.4
KRH44530	Soybean	mitochondrion	48.76	51.53
KRH47379	Soybean	mitochondrion	42.56	49.76
Solyc03g117080.2.1	Tomato	mitochondrion	47.11	49.57
PGSC0003DMT400036809	Potato	mitochondrion	47.11	49.57
CDX68804	Canola	cytosol	18.59	37.82
CDY13466	Canola	mitochondrion	36.78	36.33
CDX72338	Canola	plastid	36.78	35.6
CDY38743	Canola	cytosol	20.66	32.68
CDY55117	Canola	mitochondrion, plastid	30.17	28.19
CDX80800	Canola	mitochondrion	29.34	27.41
CDY20481	Canola	mitochondrion	27.69	27.02
CDX74831	Canola	mitochondrion	27.69	26.91
CDY47064	Canola	plastid	26.45	26.02
CDY38740	Canola	plastid	25.62	25.62
CDY47065	Canola	plastid	14.88	25.53
CDX76083	Canola	mitochondrion	25.62	23.85
CDY11346	Canola	mitochondrion	25.21	23.37
CDY43065	Canola	plastid	25.21	23.28
CDY65769	Canola	mitochondrion, plastid	24.79	23.17
CDX70103	Canola	mitochondrion	24.38	23.14
CDY70180	Canola	plastid	24.38	22.78
CDX80981	Canola	mitochondrion	24.38	22.78
CDX98894	Canola	mitochondrion	23.97	22.48
CDY70179	Canola	plastid	22.73	22.36
CDY43064	Canola	plastid	22.31	21.95

Protein Annotations

EnsemblPlants:CDX87337	EnsemblPlantsGene:GSBRNA2T00146305001	Gene3D:3.10.280.10	GO:A0A078DE47	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF16	PFAM:PF02330	ProteinID:CDX87337	ProteinID:CDX87337.1
SUPFAM:SSF54529	UniParc:UPI0004EEB455	MapMan:35.1	:	:	:

Description

BnaA07g35360D

Coordinates

chrLK031850:+:201670..202694

Molecular Weight (calculated)

27743.9 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.505

Length

242 amino acids

Sequence
(BLAST)

001: MARFLRCLRR TVFSDSPPSI AYRNPKIGLP TIQNRNFLIG GRCLSSGSYV SEMQKSAFQG NICRLIRNEI DYELNHSPPL QSPSSYGPFT VEERPGEQWI
101: SLKRKFGEKE DIKVEATMFD RSVPTSKSTR TEPDFILHIT FVVNISKGIS GESLEIVCSA WPDNIEISKL SIRKGINSSP SSYGGPEFEE LDDELQDALY
201: QFLEERGISD ELAVFLHRYM KNKSKFEYVR WMESVKSYVE KN

Best Arabidopsis Sequence Match ( AT1G80720.2 )
(BLAST)

001: MARFVRCLRR TLFSNSSPSI AHRSPRIGLP TNLNPKILIS RRCLSSGSYV SEMQKSAFQG NILRLIRNEI EYELDHSPPL QPPNSFGPFT VDERPGEQWI
101: SLKRNFGDKE DIKIEATMFD RSVPTSKSTK TEPEYILHIT FIVNISKAGA TEALEIMCSA WPDTIEISKL CIRRGINTSP SSYGGPEFEE LDDQLQDALY
201: QFLEERGISD ELAVFLHRYM KNKGKAEYVR WMESVKSYVE QK

Arabidopsis Description

Mitochondrial glycoprotein family protein [Source:TAIR;Acc:AT1G80720]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.