CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005013.1-P	Field mustard	mitochondrion	99.2	99.6
CDY20481	Canola	mitochondrion	93.98	94.35
AT2G39795.1	Thale cress	mitochondrion	76.71	76.4
CDX76083	Canola	mitochondrion	59.44	56.92
CDY65769	Canola	mitochondrion, plastid	58.63	56.37
HORVU0Hr1G006190.1	Barley	cytosol	35.34	49.44
AT2G39790.1	Thale cress	mitochondrion, plastid	46.59	48.33
GSMUA_Achr4P16890_001	Banana	mitochondrion	46.59	44.11
CDX70103	Canola	mitochondrion	43.78	42.75
HORVU3Hr1G011460.1	Barley	mitochondrion	42.97	42.13
TraesCS3A01G059200.1	Wheat	mitochondrion	43.78	42.08
Os01t0143300-01	Rice	mitochondrion	44.18	41.67
EES00334	Sorghum	mitochondrion, plastid	44.18	41.35
TraesCS3B01G071700.1	Wheat	mitochondrion	42.97	41.31
Zm00001d039883_P001	Maize	mitochondrion	41.37	40.71
CDX98894	Canola	mitochondrion	41.77	40.31
CDX80981	Canola	mitochondrion	41.37	39.77
CDY11346	Canola	mitochondrion	40.16	38.31
CDY38743	Canola	cytosol	23.29	37.91
HORVU3Hr1G085260.1	Barley	cytosol	23.69	37.34
CDY55117	Canola	mitochondrion, plastid	38.55	37.07
CDX80800	Canola	mitochondrion	37.75	36.29
Os01t0143700-00	Rice	mitochondrion	36.55	35.14
HORVU3Hr1G011490.1	Barley	cytosol	17.27	32.33
CDY38740	Canola	plastid	31.33	32.23
CDY47064	Canola	plastid	31.33	31.71
TraesCS3A01G059600.1	Wheat	plastid	34.14	31.25
TraesCS3D01G059900.1	Wheat	plastid	33.73	31.11
Os01t0143800-01	Rice	plastid	34.14	30.91
EES00333	Sorghum	plastid	33.73	30.88
TraesCS3B01G072200.1	Wheat	plastid	33.33	30.74
TraesCS3B01G072000.1	Wheat	mitochondrion	32.13	29.63
Zm00001d008610_P001	Maize	plastid	32.53	29.56
HORVU3Hr1G011560.1	Barley	plastid	34.14	29.51
CDY43064	Canola	plastid	28.92	29.27
CDY47065	Canola	plastid	16.47	29.08
CDY70180	Canola	plastid	30.12	28.96
CDY70179	Canola	plastid	28.51	28.86
CDY33373	Canola	mitochondrion	28.11	28.81
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	32.13	28.57
EES19636	Sorghum	mitochondrion	29.32	28.52
TraesCS3D01G059700.1	Wheat	mitochondrion	31.73	28.11
CDY39948	Canola	mitochondrion	27.31	28.1
CDY35045	Canola	mitochondrion	27.31	28.1
CDY43065	Canola	plastid	29.32	27.86
CDX87337	Canola	mitochondrion	26.91	27.69
Os05t0456000-01	Rice	mitochondrion	28.51	27.52
HORVU1Hr1G072660.2	Barley	mitochondrion	28.11	27.34
TraesCS3D01G059800.1	Wheat	mitochondrion	32.13	27.21
TraesCS1D01G281100.1	Wheat	mitochondrion	27.31	26.98
TraesCS3B01G071900.1	Wheat	mitochondrion	32.93	26.45
TraesCS3D01G059500.1	Wheat	mitochondrion	31.73	25.48
TraesCS1B01G291000.1	Wheat	mitochondrion	26.51	25.38
HORVU3Hr1G011580.1	Barley	mitochondrion	15.26	23.17
CDX68804	Canola	cytosol	10.84	22.69
TraesCS3D01G059600.1	Wheat	mitochondrion	25.7	22.07
CDY13466	Canola	mitochondrion	19.68	20.0
CDX72338	Canola	plastid	19.28	19.2
HORVU3Hr1G011510.1	Barley	plastid	29.32	18.02

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	GO:A0A078CCL3	EnsemblPlants:CDX74831	ProteinID:CDX74831	ProteinID:CDX74831.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
EnsemblPlantsGene:GSBRNA2T00116810001	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826
PANTHER:PTHR10826:SF12	SUPFAM:SSF54529	UniParc:UPI0004EE3B9F	SEG:seg	:	:

Description

BnaA05g05770D

Coordinates

chrLK031802:-:884992..886527

Molecular Weight (calculated)

28000.0 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.435

Length

249 amino acids

Sequence
(BLAST)

001: MAFTWCVRRS ASRLASVYGN RMSRLRSISA VVSRPSLAPT SSPFRPFALY STAIDRMSSE QSLLRVIDSE INTALQIDDP DLDEETAPGS FPFKIEDNPG
101: HQTVTLTREY KGEHIKVVVS MPSLDGDEND DEDDDDDGHS NGCSIPLVVT VTKKSGLSLE FSCMAFPDEI AIDALSVSNQ GSTLEDKLAN EGPDFECLDE
201: NLKKTFYKYL EIRGVKASTT NFLHQYMMRK VKREYLLWLK NVKKFMEES

Best Arabidopsis Sequence Match ( AT2G39795.1 )
(BLAST)

001: MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ

Arabidopsis Description

Uncharacterized protein At2g39795, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W487]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.