Factsheet for Os05t0456000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0758000-01
Os06t0219500-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	Os02t0758000-01	AT4G25200.1	21798944
AT5G02050.1	Os06t0219500-00	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19636	Sorghum	mitochondrion	61.63	62.11
HORVU1Hr1G072660.2	Barley	mitochondrion	60.08	60.55
TraesCS1D01G281100.1	Wheat	mitochondrion	57.75	59.13
TraesCS1B01G291000.1	Wheat	mitochondrion	58.53	58.08
GSMUA_Achr4P16890_001	Banana	mitochondrion	37.21	36.5
KRH73081	Soybean	mitochondrion	31.78	32.41
PGSC0003DMT400055876	Potato	mitochondrion, plastid	31.78	32.16
VIT_13s0019g02350.t01	Wine grape	mitochondrion	31.4	32.02
KRH15056	Soybean	mitochondrion	31.01	31.62
Solyc03g079930.2.1	Tomato	plastid	31.4	31.4
Os01t0143300-01	Rice	mitochondrion	31.4	30.68
KRH00042	Soybean	nucleus	29.07	29.53
Bra005705.1-P	Field mustard	mitochondrion, plastid	29.46	29.34
CDY55117	Canola	mitochondrion, plastid	29.46	29.34
KRH49169	Soybean	endoplasmic reticulum	28.68	29.25
AT2G39795.1	Thale cress	mitochondrion	28.29	29.2
Os01t0143700-00	Rice	mitochondrion	29.07	28.96
AT5G02050.1	Thale cress	mitochondrion, plastid	29.84	28.84
Bra005013.1-P	Field mustard	mitochondrion	27.52	28.63
CDX80800	Canola	mitochondrion	28.68	28.57
CDX74831	Canola	mitochondrion	27.52	28.51
CDY20481	Canola	mitochondrion	27.13	28.23
Solyc09g011250.2.1	Tomato	mitochondrion	25.97	26.69
CDX70103	Canola	mitochondrion	26.36	26.67
Os06t0326500-01	Rice	mitochondrion	27.52	26.39
AT3G55605.1	Thale cress	mitochondrion	26.36	26.36
PGSC0003DMT400022948	Potato	mitochondrion	25.58	26.29
Bra014733.1-P	Field mustard	mitochondrion	26.36	26.25
CDX76083	Canola	mitochondrion	26.36	26.15
CDY38743	Canola	cytosol	15.5	26.14
Bra009157.1-P	Field mustard	mitochondrion	25.19	25.9
CDY11346	Canola	mitochondrion	25.97	25.67
CDX98894	Canola	mitochondrion	25.58	25.58
CDY65769	Canola	mitochondrion, plastid	25.58	25.48
Bra005873.1-P	Field mustard	mitochondrion	25.58	25.29
AT2G39790.1	Thale cress	mitochondrion, plastid	23.26	25.0
AT5G05990.1	Thale cress	mitochondrion	24.81	24.71
CDY47065	Canola	plastid	13.18	24.11
Bra029081.1-P	Field mustard	plastid	20.93	23.58
Bra029050.1-P	Field mustard	plastid	22.48	23.58
CDY43064	Canola	plastid	22.48	23.58
CDY70179	Canola	plastid	22.48	23.58
CDX80981	Canola	mitochondrion	23.64	23.55
Os01t0143800-01	Rice	plastid	24.81	23.27
Os09t0557400-01	Rice	mitochondrion	19.77	22.77
Os08t0439900-01	Rice	mitochondrion	20.16	22.32
CDY47064	Canola	plastid	20.93	21.95
CDY70180	Canola	plastid	21.71	21.62
CDY38740	Canola	plastid	20.16	21.49
CDY43065	Canola	plastid	21.71	21.37
Bra029051.1-P	Field mustard	plastid	21.71	21.37
Bra029083.1-P	Field mustard	mitochondrion	14.73	20.0
Bra029082.1-P	Field mustard	plastid	12.02	18.9

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	EntrezGene:4338984	ProteinID:AAU90218.1	EMBL:AK058420	EMBL:AK102036
ProteinID:BAF17642.1	ProteinID:BAS94363.1	ProteinID:EEE63959.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf
EnsemblPlantsGene:Os05g0456000	EnsemblPlants:Os05t0456000-01	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF10	UniProt:Q60EL9
SUPFAM:SSF54529	UniParc:UPI000044479F	RefSeq:XP_015640122.1	SEG:seg	:	:

Description

Mitochondrial glycoprotein family protein. (Os05t0456000-01)

Coordinates

chr5:-:22404538..22406227

Molecular Weight (calculated)

28673.7 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.497

Length

258 amino acids

Sequence
(BLAST)

001: MAVSSTLRRA RSHPSWAAAA RGLLATWGAG SGGRVRHPRH GAASASLFSS LSSSQTSAAD AQLLRVINME ISYAQKDCKN RNWSKELGEG FPFEIQDKDG
101: TNMMTLKRSD HKEQIEVEVF LPSAVNEAEE NGEPEDQCED GKHRTHIGNG VPAQYCIPLI VRVRKEAASY LKISCSSYPN ELIIESLSFE PNDESGDSAS
201: LEAKLSNLPE EFQKAVYSYL KSRCISTDIT DFLHAYMINK ECHEYLSWLR KVKGLIKS

Best Arabidopsis Sequence Match ( AT5G05990.1 )
(BLAST)

001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY

Arabidopsis Description

AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.