Factsheet for Os08t0439900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8
nucleus 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G514500.1	Wheat	mitochondrion	73.39	76.0
TraesCS2B01G542100.1	Wheat	mitochondrion	70.82	74.32
TraesCS2D01G516100.1	Wheat	mitochondrion	72.1	71.79
Zm00001d032163_P001	Maize	mitochondrion	67.81	68.7
EES15053	Sorghum	mitochondrion	66.52	67.1
GSMUA_Achr5P22820_001	Banana	mitochondrion	50.64	51.98
HORVU2Hr1G113990.2	Barley	plastid	34.33	43.01
Os09t0557400-01	Rice	mitochondrion	40.77	42.41
CDX68804	Canola	cytosol	18.03	35.29
KRH05267	Soybean	mitochondrion	34.33	34.19
PGSC0003DMT400067216	Potato	mitochondrion	34.33	33.9
KRH15786	Soybean	mitochondrion	34.33	33.76
Solyc06g065800.2.1	Tomato	mitochondrion	33.91	33.47
VIT_04s0008g05940.t01	Wine grape	mitochondrion	35.19	32.8
CDY13466	Canola	mitochondrion	32.62	31.02
Bra023971.1-P	Field mustard	plastid	33.05	30.68
AT4G31930.1	Thale cress	mitochondrion	30.04	29.91
CDX72338	Canola	plastid	30.9	28.8
Os01t0143300-01	Rice	mitochondrion	24.03	21.21
Os05t0456000-01	Rice	mitochondrion	22.32	20.16
Os06t0326500-01	Rice	mitochondrion	22.32	19.33
Os01t0143700-00	Rice	mitochondrion	21.46	19.3
Os01t0143800-01	Rice	plastid	20.6	17.45

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.2	ProteinID:BAD09884.1	ProteinID:BAF23813.1	ProteinID:BAT05615.1	ProteinID:EAZ42873.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	EnsemblPlantsGene:Os08g0439900	EnsemblPlants:Os08t0439900-01	PFAM:PF02330
PANTHER:PTHR10826	PANTHER:PTHR10826:SF16	UniProt:Q6Z9I3	SUPFAM:SSF54529	UniParc:UPI000023AF60	SEG:seg

Description

Mitochondrial glycoprotein family protein. (Os08t0439900-01)

Coordinates

chr8:+:21397710..21399445

Molecular Weight (calculated)

26326.1 Da

IEP (calculated)

6.688

GRAVY (calculated)

-0.641

Length

233 amino acids

Sequence
(BLAST)

001: MARRLLRLRA HAAGLSQRLA PRLLPSRPYI SDMRRSAFSD RLLRSLRSEI SSRRAPSPPP SAAPFAVDDR PGEQWIRLRR AFGGDDDDEK EEVRVDATMV
101: DGATAPTRSG EVAGAGPDDA AGPQLRMHIS VNVEVTKAAR RDLALTFECS AWPDEMEVER VYPVRRGGPA AAQQYMGRQF SELDDEMQST VHDYLEHRGV
201: NDELAAFLHS YMENKEQTEL VRWFKNVECF IKK

Best Arabidopsis Sequence Match ( AT1G80720.2 )
(BLAST)

001: MARFVRCLRR TLFSNSSPSI AHRSPRIGLP TNLNPKILIS RRCLSSGSYV SEMQKSAFQG NILRLIRNEI EYELDHSPPL QPPNSFGPFT VDERPGEQWI
101: SLKRNFGDKE DIKIEATMFD RSVPTSKSTK TEPEYILHIT FIVNISKAGA TEALEIMCSA WPDTIEISKL CIRRGINTSP SSYGGPEFEE LDDQLQDALY
201: QFLEERGISD ELAVFLHRYM KNKGKAEYVR WMESVKSYVE QK

Arabidopsis Description

Mitochondrial glycoprotein family protein [Source:TAIR;Acc:AT1G80720]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.