Factsheet for Solyc06g065800.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067216	Potato	mitochondrion	94.49	94.49
AT4G31930.1	Thale cress	mitochondrion	51.27	51.71
VIT_04s0008g05940.t01	Wine grape	mitochondrion	54.66	51.6
CDX68804	Canola	cytosol	25.42	50.42
CDY13466	Canola	mitochondrion	50.42	48.57
KRH05267	Soybean	mitochondrion	47.46	47.86
KRH15786	Soybean	mitochondrion	47.88	47.68
CDX72338	Canola	plastid	50.42	47.6
Bra023971.1-P	Field mustard	plastid	50.42	47.41
Solyc03g117080.2.1	Tomato	mitochondrion	42.37	43.48
GSMUA_Achr10P...	Banana	mitochondrion	38.56	42.33
GSMUA_Achr5P22820_001	Banana	mitochondrion	39.83	41.41
Os09t0557400-01	Rice	mitochondrion	34.75	36.61
TraesCS5B01G360700.1	Wheat	mitochondrion	35.59	35.59
KXG36169	Sorghum	mitochondrion	35.59	35.59
TraesCS2B01G542100.1	Wheat	mitochondrion	33.47	35.59
TraesCS2A01G514500.1	Wheat	mitochondrion	33.47	35.11
TraesCS5D01G367500.2	Wheat	mitochondrion	35.17	35.02
Os08t0439900-01	Rice	mitochondrion	33.47	33.91
EES15053	Sorghum	mitochondrion	32.63	33.33
TraesCS2D01G516100.1	Wheat	mitochondrion	31.78	32.05
Zm00001d032163_P001	Maize	mitochondrion	30.93	31.74
TraesCS5A01G358200.1	Wheat	mitochondrion	34.32	30.22
Solyc09g011250.2.1	Tomato	mitochondrion	25.0	23.51
HORVU5Hr1G088460.2	Barley	mitochondrion	25.0	21.45
Solyc03g079930.2.1	Tomato	plastid	22.46	20.54
HORVU2Hr1G113990.2	Barley	plastid	14.41	18.28

Protein Annotations

EnsemblPlants:Solyc06g065800.2.1	EnsemblPlantsGene:Solyc06g065800.2	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf
PANTHER:PTHR10826	PANTHER:PTHR10826:SF14	PFAM:PF02330	SUPFAM:SSF54529	UniParc:UPI0002765998	UniProt:K4C7K8
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:41237129..41240630

Molecular Weight (calculated)

27072.3 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.390

Length

236 amino acids

Sequence
(BLAST)

001: MAAFLRASRR SLLSCCGILY SHGQQSSLNS SKHIFQFFRS HASQAIQKSP FESNILRILR NEIEYQLDYA PPHPPVTKFN TFMVEDRPGE QWVTLRRKFG
101: EDEHIKIEAT MIDGAITIPK GNDENLGEDV RLHISVLVDI WKGEGSDFLE FVCSSWPNSL EIQKVYLLRS DSSRAQPYMG PNVKDLNSGF RDGLNEFLKA
201: RGIGDELSAF LHEFMMNKDR IEAIGWLRKI QSFVEK

Best Arabidopsis Sequence Match ( AT4G31930.1 )
(BLAST)

001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ

Arabidopsis Description

AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.