Factsheet for HORVU5Hr1G088460.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G360700.1	Wheat	mitochondrion	47.27	55.08
TraesCS5D01G367500.2	Wheat	mitochondrion	45.82	53.16
TraesCS5A01G358200.1	Wheat	mitochondrion	48.36	49.63
Os09t0557400-01	Rice	mitochondrion	34.91	42.86
KXG36169	Sorghum	mitochondrion	36.0	41.95
GSMUA_Achr10P...	Banana	mitochondrion	23.64	30.23
KRH15786	Soybean	mitochondrion	22.55	26.16
KRH05267	Soybean	mitochondrion	21.82	25.64
Solyc06g065800.2.1	Tomato	mitochondrion	21.45	25.0
PGSC0003DMT400067216	Potato	mitochondrion	21.45	25.0
CDY13466	Canola	mitochondrion	19.64	22.04
VIT_04s0008g05940.t01	Wine grape	mitochondrion	20.0	22.0
AT4G31930.1	Thale cress	mitochondrion	18.55	21.79
CDX72338	Canola	plastid	19.64	21.6
Bra023971.1-P	Field mustard	plastid	19.64	21.51
CDX68804	Canola	cytosol	6.91	15.97
HORVU0Hr1G006190.1	Barley	cytosol	9.82	15.17
HORVU7Hr1G046980.1	Barley	mitochondrion	14.18	14.89
HORVU3Hr1G085260.1	Barley	cytosol	8.36	14.56
HORVU3Hr1G011580.1	Barley	mitochondrion	8.36	14.02
HORVU3Hr1G011460.1	Barley	mitochondrion	12.73	13.78
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	13.45	13.21
HORVU2Hr1G113990.2	Barley	plastid	8.73	12.9
HORVU1Hr1G072660.2	Barley	mitochondrion	12.0	12.89
HORVU3Hr1G011560.1	Barley	plastid	12.36	11.81
HORVU3Hr1G011490.1	Barley	cytosol	5.09	10.53
HORVU3Hr1G011510.1	Barley	plastid	11.64	7.9

Protein Annotations

EnsemblPlants:HORVU5Hr1G088460.2	EnsemblPlantsGene:HORVU5Hr1G088460	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf
PANTHER:PTHR10826	PANTHER:PTHR10826:SF13	SEG:seg	SUPFAM:SSF54529	UniParc:UPI000B486016	UniProt:A0A287S6L0
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:581826979..581828254

Molecular Weight (calculated)

29956.5 Da

IEP (calculated)

12.151

GRAVY (calculated)

-0.233

Length

275 amino acids

Sequence
(BLAST)

001: TILGLLVRQM RPGLAHFLAL IASIPRCAPI VQAKRRAHGA RPPPPPRRAL LSPLPGRPHG AQAGPVILLR HRHRHRHRRR AAALHARRTP APPPAIRDLL
101: RRRPPPSPPG TAPLPLTPRP FPPHVISPSD SPAVPSQPPT GFKSFAVEDR PGEQWVRLRA ARRGAGSRTE EEAIKIDATL FDGVAETPPD ASLFHRVEAL
201: EQGPRLHLSL IVEVARADRV LGFICSAWPD QLTVRHVLTL SGAGAATDDR GAREFTYGLI LFSPFWLGAS GFCAL

Best Arabidopsis Sequence Match ( AT4G31930.1 )
(BLAST)

001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ

Arabidopsis Description

AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.