Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G011470.3 | Barley | mitochondrion, plastid | 82.93 | 48.57 |
| TraesCS3D01G059800.1 | Wheat | mitochondrion | 75.61 | 42.18 |
| Os01t0143300-01 | Rice | mitochondrion | 29.27 | 18.18 |
| Zm00001d039883_P001 | Maize | mitochondrion | 27.44 | 17.79 |
| EES00334 | Sorghum | mitochondrion, plastid | 27.44 | 16.92 |
| AT2G39795.1 | Thale cress | mitochondrion | 25.61 | 16.8 |
| HORVU3Hr1G085260.1 | Barley | cytosol | 15.85 | 16.46 |
| HORVU3Hr1G011460.1 | Barley | mitochondrion | 25.0 | 16.14 |
| PGSC0003DMT400055876 | Potato | mitochondrion, plastid | 24.39 | 15.69 |
| Bra005013.1-P | Field mustard | mitochondrion | 23.17 | 15.32 |
| CDY20481 | Canola | mitochondrion | 23.17 | 15.32 |
| CDX74831 | Canola | mitochondrion | 23.17 | 15.26 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 24.39 | 15.21 |
| Solyc03g079930.2.1 | Tomato | plastid | 23.17 | 14.73 |
| Bra014733.1-P | Field mustard | mitochondrion | 23.17 | 14.67 |
| HORVU0Hr1G006190.1 | Barley | cytosol | 15.85 | 14.61 |
| HORVU7Hr1G046980.1 | Barley | mitochondrion | 22.56 | 14.12 |
| AT3G55605.1 | Thale cress | mitochondrion | 21.95 | 13.95 |
| CDX76083 | Canola | mitochondrion | 21.95 | 13.85 |
| Solyc09g011250.2.1 | Tomato | mitochondrion | 20.73 | 13.55 |
| PGSC0003DMT400022948 | Potato | mitochondrion | 20.73 | 13.55 |
| HORVU3Hr1G011560.1 | Barley | plastid | 23.78 | 13.54 |
| CDY65769 | Canola | mitochondrion, plastid | 21.34 | 13.51 |
| VIT_13s0019g02350.t01 | Wine grape | mitochondrion | 20.73 | 13.44 |
| CDX70103 | Canola | mitochondrion | 20.73 | 13.33 |
| CDX98894 | Canola | mitochondrion | 20.73 | 13.18 |
| Bra009157.1-P | Field mustard | mitochondrion | 20.12 | 13.15 |
| Os01t0143700-00 | Rice | mitochondrion | 20.73 | 13.13 |
| AT2G39790.1 | Thale cress | mitochondrion, plastid | 18.9 | 12.92 |
| CDX80981 | Canola | mitochondrion | 20.12 | 12.74 |
| KRH49169 | Soybean | endoplasmic reticulum | 19.51 | 12.65 |
| KRH00042 | Soybean | nucleus | 19.51 | 12.6 |
| HORVU3Hr1G011510.1 | Barley | plastid | 31.1 | 12.59 |
| AT5G05990.1 | Thale cress | mitochondrion | 19.51 | 12.36 |
| Bra005873.1-P | Field mustard | mitochondrion | 18.9 | 11.88 |
| CDY11346 | Canola | mitochondrion | 18.9 | 11.88 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 18.9 | 11.61 |
| HORVU1Hr1G072660.2 | Barley | mitochondrion | 17.68 | 11.33 |
| CDX80800 | Canola | mitochondrion | 17.68 | 11.2 |
| Bra029082.1-P | Field mustard | plastid | 10.98 | 10.98 |
| Bra005705.1-P | Field mustard | mitochondrion, plastid | 17.07 | 10.81 |
| CDY55117 | Canola | mitochondrion, plastid | 17.07 | 10.81 |
| KRH15056 | Soybean | mitochondrion | 16.46 | 10.67 |
| KRH73081 | Soybean | mitochondrion | 16.46 | 10.67 |
| Bra029081.1-P | Field mustard | plastid | 14.63 | 10.48 |
| CDY70180 | Canola | plastid | 15.85 | 10.04 |
| CDY43065 | Canola | plastid | 15.85 | 9.92 |
| Bra029051.1-P | Field mustard | plastid | 15.85 | 9.92 |
| CDY43064 | Canola | plastid | 14.02 | 9.35 |
| Bra029050.1-P | Field mustard | plastid | 14.02 | 9.35 |
| CDY70179 | Canola | plastid | 13.41 | 8.94 |
| HORVU5Hr1G088460.2 | Barley | mitochondrion | 14.02 | 8.36 |
| CDY38740 | Canola | plastid | 10.98 | 7.44 |
| CDY47064 | Canola | plastid | 10.98 | 7.32 |
| CDY47065 | Canola | plastid | 6.1 | 7.09 |
| CDY38743 | Canola | cytosol | 6.1 | 6.54 |
| Bra029083.1-P | Field mustard | mitochondrion | 6.71 | 5.79 |
| HORVU2Hr1G113990.2 | Barley | plastid | 1.83 | 1.61 |
| HORVU3Hr1G011490.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G011580.1 | EnsemblPlantsGene:HORVU3Hr1G011580 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005759 | InterPro:MAM33 | PFAM:PF02330 | SEG:seg | SignalP:SignalP-noTM |
| UniParc:UPI000B4865B1 | UniProt:A0A287K3S7 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:25028086..25030588
Molecular Weight (calculated)
17903.4 Da
IEP (calculated)
6.277
GRAVY (calculated)
-0.257
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: SFLLPLRVMA LLAARRAAAA LVRPSAAAAI LRHTPAGARF SSAPDYRPFV RGLREGSEFL RAEKEQSSRP SAAELRAKAD SLRAATHDGE IVGVLNSVIQ
101: SHRRDLVKGI PKDFPFEMSR TDGIPNITLT RSLNGEQIEV LVSMPKLDQD EDCDVGLQED EAEI
101: SHRRDLVKGI PKDFPFEMSR TDGIPNITLT RSLNGEQIEV LVSMPKLDQD EDCDVGLQED EAEI
001: MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ
Arabidopsis Description
Uncharacterized protein At2g39795, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W487]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.