Factsheet for Bra005873.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11346	Canola	mitochondrion	98.08	98.08
Bra009157.1-P	Field mustard	mitochondrion	85.44	88.84
AT5G05990.1	Thale cress	mitochondrion	79.69	80.31
HORVU0Hr1G006190.1	Barley	cytosol	37.16	54.49
HORVU3Hr1G011460.1	Barley	mitochondrion	45.98	47.24
TraesCS3A01G059200.1	Wheat	mitochondrion	45.98	46.33
VIT_13s0019g02350.t01	Wine grape	mitochondrion	44.83	46.25
TraesCS3B01G071700.1	Wheat	mitochondrion	45.59	45.95
Os01t0143300-01	Rice	mitochondrion	45.59	45.08
Zm00001d039883_P001	Maize	mitochondrion	43.68	45.06
Solyc03g079930.2.1	Tomato	plastid	44.44	44.96
EES00334	Sorghum	mitochondrion, plastid	44.83	43.98
GSMUA_Achr4P16890_001	Banana	mitochondrion	44.06	43.73
PGSC0003DMT400055876	Potato	mitochondrion, plastid	41.38	42.35
KRH73081	Soybean	mitochondrion	41.0	42.29
KRH15056	Soybean	mitochondrion	40.23	41.5
Bra005013.1-P	Field mustard	mitochondrion	39.08	41.13
Bra014733.1-P	Field mustard	mitochondrion	39.85	40.15
HORVU3Hr1G085260.1	Barley	cytosol	23.75	39.24
HORVU3Hr1G011490.1	Barley	cytosol	19.54	38.35
Bra005705.1-P	Field mustard	mitochondrion, plastid	34.87	35.14
Os01t0143700-00	Rice	mitochondrion	34.1	34.36
Os01t0143800-01	Rice	plastid	32.95	31.27
EES00333	Sorghum	plastid	31.03	29.78
TraesCS1D01G281100.1	Wheat	mitochondrion	28.74	29.76
Zm00001d008610_P001	Maize	plastid	31.03	29.56
Bra029083.1-P	Field mustard	mitochondrion	21.46	29.47
HORVU1Hr1G072660.2	Barley	mitochondrion	28.74	29.3
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	31.42	29.29
TraesCS3A01G059600.1	Wheat	plastid	30.27	29.04
Bra029081.1-P	Field mustard	plastid	24.9	28.38
TraesCS3D01G059900.1	Wheat	plastid	29.12	28.15
TraesCS3B01G072200.1	Wheat	plastid	28.74	27.78
TraesCS1B01G291000.1	Wheat	mitochondrion	27.59	27.69
HORVU3Hr1G011560.1	Barley	plastid	30.27	27.43
Bra029051.1-P	Field mustard	plastid	27.2	27.1
TraesCS3B01G072000.1	Wheat	mitochondrion	27.97	27.04
EES19636	Sorghum	mitochondrion	26.05	26.56
Bra026096.1-P	Field mustard	mitochondrion	24.14	26.03
Bra029050.1-P	Field mustard	plastid	24.52	26.02
TraesCS3D01G059700.1	Wheat	mitochondrion	27.97	25.98
Os05t0456000-01	Rice	mitochondrion	25.29	25.58
TraesCS3D01G059800.1	Wheat	mitochondrion	28.35	25.17
Bra035158.1-P	Field mustard	mitochondrion	22.22	23.97
TraesCS3B01G071900.1	Wheat	mitochondrion	28.35	23.87
TraesCS3D01G059500.1	Wheat	mitochondrion	27.2	22.9
TraesCS3D01G059600.1	Wheat	mitochondrion	25.29	22.76
Bra023971.1-P	Field mustard	plastid	21.07	21.91
Bra029082.1-P	Field mustard	plastid	12.26	19.51
HORVU3Hr1G011580.1	Barley	mitochondrion	11.88	18.9
HORVU3Hr1G011510.1	Barley	plastid	24.9	16.05

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	EnsemblPlantsGene:Bra005873	EnsemblPlants:Bra005873.1	EnsemblPlants:Bra005873.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561
UniProt:M4CNT5	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12
SUPFAM:SSF54529	UniParc:UPI000253F5D7	SEG:seg	:	:	:

Description

AT5G05990 (E=1e-099) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA03:-:1012597..1013564

Molecular Weight (calculated)

29899.3 Da

IEP (calculated)

5.468

GRAVY (calculated)

-0.698

Length

261 amino acids

Sequence
(BLAST)

001: MATLLRRTAS RLVGSCIKNR FSVNPFYNQT TCAPHGRLRH LTPSISRNNH FTTSARKRAS SNDPLLRVIE AEIGFAEQAD DYNRVEETPS GFPFKMEDKP
101: GTKIVTLTRD YQGESVIVEV HMTNLVTGDK GDDEDEEESD EEEEEDEDKP EKPKQSNVPL LVTLSKETGP SLEFRCTAFP DKIVIKDMWV TFPGDPSKDE
201: LAYEGPSFRV LDEKLRKAFH RYIEIRGITP GMINFLHEYM INKDSKEHLL WLKTLKNFVK S

Best Arabidopsis Sequence Match ( AT5G05990.1 )
(BLAST)

001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY

Arabidopsis Description

AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.