Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G281100.1 | Wheat | mitochondrion | 89.62 | 92.46 |
| HORVU1Hr1G072660.2 | Barley | mitochondrion | 81.15 | 82.42 |
| Os05t0456000-01 | Rice | mitochondrion | 58.08 | 58.53 |
| EES19636 | Sorghum | mitochondrion | 56.54 | 57.42 |
| TraesCS3B01G071700.1 | Wheat | mitochondrion | 33.85 | 33.98 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 33.85 | 33.46 |
| KRH15056 | Soybean | mitochondrion | 31.15 | 32.02 |
| KRH73081 | Soybean | mitochondrion | 31.15 | 32.02 |
| VIT_13s0019g02350.t01 | Wine grape | mitochondrion | 30.0 | 30.83 |
| Bra005705.1-P | Field mustard | mitochondrion, plastid | 30.38 | 30.5 |
| CDY55117 | Canola | mitochondrion, plastid | 30.38 | 30.5 |
| PGSC0003DMT400055876 | Potato | mitochondrion, plastid | 29.62 | 30.2 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 30.77 | 29.96 |
| CDX80800 | Canola | mitochondrion | 29.62 | 29.73 |
| Solyc03g079930.2.1 | Tomato | plastid | 28.85 | 29.07 |
| CDX70103 | Canola | mitochondrion | 28.08 | 28.63 |
| CDY11346 | Canola | mitochondrion | 28.08 | 27.97 |
| Bra009157.1-P | Field mustard | mitochondrion | 26.92 | 27.89 |
| Bra005873.1-P | Field mustard | mitochondrion | 27.69 | 27.59 |
| CDX80981 | Canola | mitochondrion | 27.31 | 27.41 |
| AT2G39795.1 | Thale cress | mitochondrion | 26.15 | 27.2 |
| CDX98894 | Canola | mitochondrion | 26.92 | 27.13 |
| AT5G05990.1 | Thale cress | mitochondrion | 26.92 | 27.03 |
| KRH49169 | Soybean | endoplasmic reticulum | 26.15 | 26.88 |
| KRH00042 | Soybean | nucleus | 26.15 | 26.77 |
| CDY20481 | Canola | mitochondrion | 25.38 | 26.61 |
| Bra005013.1-P | Field mustard | mitochondrion | 25.38 | 26.61 |
| CDX74831 | Canola | mitochondrion | 25.38 | 26.51 |
| AT3G55605.1 | Thale cress | mitochondrion | 26.15 | 26.36 |
| Solyc09g011250.2.1 | Tomato | mitochondrion | 25.38 | 26.29 |
| AT2G39790.1 | Thale cress | mitochondrion, plastid | 24.23 | 26.25 |
| Bra014733.1-P | Field mustard | mitochondrion | 25.77 | 25.87 |
| CDX76083 | Canola | mitochondrion | 25.77 | 25.77 |
| PGSC0003DMT400022948 | Potato | mitochondrion | 24.62 | 25.5 |
| CDY38743 | Canola | cytosol | 14.62 | 24.84 |
| CDY65769 | Canola | mitochondrion, plastid | 24.62 | 24.71 |
| CDY70179 | Canola | plastid | 22.69 | 23.98 |
| CDY43064 | Canola | plastid | 22.69 | 23.98 |
| Bra029050.1-P | Field mustard | plastid | 22.69 | 23.98 |
| CDY70180 | Canola | plastid | 23.46 | 23.55 |
| TraesCS2B01G542100.1 | Wheat | mitochondrion | 20.0 | 23.42 |
| TraesCS3B01G072200.1 | Wheat | plastid | 24.23 | 23.33 |
| TraesCS7B01G193700.1 | Wheat | mitochondrion | 23.46 | 22.93 |
| TraesCS3B01G071900.1 | Wheat | mitochondrion | 27.31 | 22.9 |
| Bra029051.1-P | Field mustard | plastid | 23.08 | 22.9 |
| CDY43065 | Canola | plastid | 23.08 | 22.9 |
| TraesCS5B01G360700.1 | Wheat | mitochondrion | 20.77 | 22.88 |
| CDY38740 | Canola | plastid | 20.38 | 21.9 |
| TraesCS3B01G072000.1 | Wheat | mitochondrion | 22.69 | 21.85 |
| Bra029081.1-P | Field mustard | plastid | 19.23 | 21.83 |
| CDY47064 | Canola | plastid | 20.38 | 21.54 |
| CDY47065 | Canola | plastid | 11.54 | 21.28 |
| Bra029083.1-P | Field mustard | mitochondrion | 14.23 | 19.47 |
| Bra029082.1-P | Field mustard | plastid | 10.38 | 16.46 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G291000.1 | EnsemblPlantsGene:TraesCS1B01G291000 | Gene3D:3.10.280.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 | InterPro:MAM33_sf |
| PANTHER:PTHR10826 | PANTHER:PTHR10826:SF10 | PFAM:PF02330 | SEG:seg | SUPFAM:SSF54529 | MapMan:35.2 |
Description
No Description!
Coordinates
chr1B:-:508545216..508546210
Molecular Weight (calculated)
28059.5 Da
IEP (calculated)
7.503
GRAVY (calculated)
-0.301
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAIASALR RAPRAAAATR ALLAALGSPR GGRVGPPHHR AAPIAPLSSL SAPQPSAVAD AQLLRVITYE ISRAQLDCRN RNWAKVLGEG FPFEIRDKEG
101: TNRITLTRTH QDERIEVEAL LPSPVDGAAQ DDGEQEEDDQ ADEDGKKQGH AGGDVPNKYC IPLIVRIRKG VGAASCLEIG CCSYPTGFVV ERLEFESAGG
201: RGSGTAFSDI PGELQKALQL YLGSRGISTH FTDFMHAYMI TKECHEYLSW LRKLKGLVKG
101: TNRITLTRTH QDERIEVEAL LPSPVDGAAQ DDGEQEEDDQ ADEDGKKQGH AGGDVPNKYC IPLIVRIRKG VGAASCLEIG CCSYPTGFVV ERLEFESAGG
201: RGSGTAFSDI PGELQKALQL YLGSRGISTH FTDFMHAYMI TKECHEYLSW LRKLKGLVKG
001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
Arabidopsis Description
At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.