CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005013.1-P	Field mustard	mitochondrion	94.35	94.35
CDX74831	Canola	mitochondrion	94.35	93.98
AT2G39795.1	Thale cress	mitochondrion	76.21	75.6
CDX76083	Canola	mitochondrion	59.27	56.54
CDY65769	Canola	mitochondrion, plastid	58.47	55.98
HORVU0Hr1G006190.1	Barley	cytosol	35.08	48.88
AT2G39790.1	Thale cress	mitochondrion, plastid	46.37	47.92
GSMUA_Achr4P16890_001	Banana	mitochondrion	45.97	43.35
CDX70103	Canola	mitochondrion	44.35	43.14
HORVU3Hr1G011460.1	Barley	mitochondrion	42.74	41.73
TraesCS3A01G059200.1	Wheat	mitochondrion	43.55	41.7
CDX98894	Canola	mitochondrion	43.15	41.47
Os01t0143300-01	Rice	mitochondrion	43.95	41.29
TraesCS3B01G071700.1	Wheat	mitochondrion	42.74	40.93
EES00334	Sorghum	mitochondrion, plastid	43.55	40.6
CDX80981	Canola	mitochondrion	41.53	39.77
Zm00001d039883_P001	Maize	mitochondrion	40.32	39.53
CDY11346	Canola	mitochondrion	40.73	38.7
CDY38743	Canola	cytosol	23.39	37.91
CDY55117	Canola	mitochondrion, plastid	39.11	37.45
HORVU3Hr1G085260.1	Barley	cytosol	23.39	36.71
CDX80800	Canola	mitochondrion	38.31	36.68
Os01t0143700-00	Rice	mitochondrion	37.5	35.91
HORVU3Hr1G011490.1	Barley	cytosol	17.34	32.33
CDY38740	Canola	plastid	31.45	32.23
CDY47064	Canola	plastid	31.45	31.71
TraesCS3A01G059600.1	Wheat	plastid	34.68	31.62
TraesCS3D01G059900.1	Wheat	plastid	34.27	31.48
EES00333	Sorghum	plastid	34.27	31.25
TraesCS3B01G072200.1	Wheat	plastid	33.87	31.11
Os01t0143800-01	Rice	plastid	33.87	30.55
CDY43064	Canola	plastid	29.84	30.08
Zm00001d008610_P001	Maize	plastid	33.06	29.93
CDY70180	Canola	plastid	31.05	29.73
CDY70179	Canola	plastid	29.44	29.67
TraesCS3B01G072000.1	Wheat	mitochondrion	32.26	29.63
HORVU3Hr1G011560.1	Barley	plastid	34.27	29.51
CDY47065	Canola	plastid	16.53	29.08
CDY33373	Canola	mitochondrion	28.23	28.81
CDY43065	Canola	plastid	30.24	28.63
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	32.26	28.57
EES19636	Sorghum	mitochondrion	29.03	28.12
CDY39948	Canola	mitochondrion	27.42	28.1
CDY35045	Canola	mitochondrion	27.42	28.1
TraesCS3D01G059700.1	Wheat	mitochondrion	31.45	27.76
CDX87337	Canola	mitochondrion	27.02	27.69
TraesCS3D01G059800.1	Wheat	mitochondrion	32.66	27.55
Os05t0456000-01	Rice	mitochondrion	28.23	27.13
HORVU1Hr1G072660.2	Barley	mitochondrion	27.82	26.95
TraesCS1D01G281100.1	Wheat	mitochondrion	27.02	26.59
TraesCS3B01G071900.1	Wheat	mitochondrion	31.85	25.48
TraesCS1B01G291000.1	Wheat	mitochondrion	26.61	25.38
TraesCS3D01G059500.1	Wheat	mitochondrion	30.65	24.52
HORVU3Hr1G011580.1	Barley	mitochondrion	15.32	23.17
CDX68804	Canola	cytosol	10.89	22.69
TraesCS3D01G059600.1	Wheat	mitochondrion	25.81	22.07
CDY13466	Canola	mitochondrion	20.16	20.41
CDX72338	Canola	plastid	19.76	19.6
HORVU3Hr1G011510.1	Barley	plastid	28.63	17.53

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	GO:A0A078G4X8	UniProt:A0A078G4X8	EnsemblPlants:CDY20481	ProteinID:CDY20481
ProteinID:CDY20481.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	EnsemblPlantsGene:GSBRNA2T00012576001	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330
PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	SUPFAM:SSF54529	UniParc:UPI0004EDC064	SEG:seg	:

Description

BnaC04g05630DBnaC04g05630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4X8]

Coordinates

chrLK032108:+:415484..417140

Molecular Weight (calculated)

27851.9 Da

IEP (calculated)

4.840

GRAVY (calculated)

-0.425

Length

248 amino acids

Sequence
(BLAST)

001: MAFTWCVRRS ASRLASLCST RMVRVRSISA VASRPSLAPT PSPSRPFALY STAIDRMSSE QSLLRVIDSE INTALQIDDP DLDEETAPGS FPFKIEDNPG
101: HQTVTLTREY KGEHIKVVVS MPSFDSDEKD DEDDEDGHSN GSSIPLVVTV TKKSGLSLEF SCMAFPDEIA IDALSVSNQG STLEDKLANE GPDFECLDEN
201: LKKTFYKYLE IRGVKASTTN FLHQYMMRKV KREYLLWLKN VKKFMEES

Best Arabidopsis Sequence Match ( AT2G39795.1 )
(BLAST)

001: MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ

Arabidopsis Description

Uncharacterized protein At2g39795, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W487]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.