Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G071700.1 | Wheat | mitochondrion | 97.3 | 97.3 |
| HORVU3Hr1G011460.1 | Barley | mitochondrion | 91.89 | 93.7 |
| HORVU0Hr1G006190.1 | Barley | cytosol | 64.09 | 93.26 |
| Os01t0143300-01 | Rice | mitochondrion | 75.68 | 74.24 |
| EES00334 | Sorghum | mitochondrion, plastid | 74.13 | 72.18 |
| HORVU3Hr1G085260.1 | Barley | cytosol | 44.02 | 72.15 |
| Zm00001d039883_P001 | Maize | mitochondrion | 66.8 | 68.38 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 57.92 | 57.03 |
| VIT_13s0019g02350.t01 | Wine grape | mitochondrion | 53.28 | 54.55 |
| Os01t0143700-00 | Rice | mitochondrion | 51.74 | 51.74 |
| Solyc03g079930.2.1 | Tomato | plastid | 50.58 | 50.78 |
| PGSC0003DMT400055876 | Potato | mitochondrion, plastid | 49.03 | 49.8 |
| CDX70103 | Canola | mitochondrion | 47.49 | 48.24 |
| KRH73081 | Soybean | mitochondrion | 47.1 | 48.22 |
| Bra009157.1-P | Field mustard | mitochondrion | 46.72 | 48.21 |
| KRH15056 | Soybean | mitochondrion | 46.72 | 47.83 |
| CDX98894 | Canola | mitochondrion | 46.72 | 46.9 |
| Bra005873.1-P | Field mustard | mitochondrion | 46.33 | 45.98 |
| CDY11346 | Canola | mitochondrion | 46.33 | 45.98 |
| AT5G05990.1 | Thale cress | mitochondrion | 45.56 | 45.56 |
| KRH49169 | Soybean | endoplasmic reticulum | 43.63 | 44.66 |
| KRH00042 | Soybean | nucleus | 43.63 | 44.49 |
| Bra005013.1-P | Field mustard | mitochondrion | 42.47 | 44.35 |
| CDX80981 | Canola | mitochondrion | 44.02 | 44.02 |
| CDX74831 | Canola | mitochondrion | 42.08 | 43.78 |
| AT2G39795.1 | Thale cress | mitochondrion | 42.08 | 43.6 |
| CDY20481 | Canola | mitochondrion | 41.7 | 43.55 |
| AT3G55605.1 | Thale cress | mitochondrion | 43.24 | 43.41 |
| CDX76083 | Canola | mitochondrion | 40.93 | 40.77 |
| Bra014733.1-P | Field mustard | mitochondrion | 40.54 | 40.54 |
| CDY65769 | Canola | mitochondrion, plastid | 40.15 | 40.15 |
| CDY38743 | Canola | cytosol | 23.17 | 39.22 |
| CDX80800 | Canola | mitochondrion | 39.0 | 39.0 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 40.15 | 38.95 |
| PGSC0003DMT400022948 | Potato | mitochondrion | 37.45 | 38.65 |
| Bra005705.1-P | Field mustard | mitochondrion, plastid | 38.61 | 38.61 |
| CDY55117 | Canola | mitochondrion, plastid | 38.61 | 38.61 |
| Solyc09g011250.2.1 | Tomato | mitochondrion | 37.07 | 38.25 |
| AT2G39790.1 | Thale cress | mitochondrion, plastid | 33.59 | 36.25 |
| TraesCS3A01G059600.1 | Wheat | plastid | 37.45 | 35.66 |
| Bra029083.1-P | Field mustard | mitochondrion | 25.48 | 34.74 |
| Bra029081.1-P | Field mustard | plastid | 30.5 | 34.5 |
| CDY47064 | Canola | plastid | 32.05 | 33.74 |
| CDY47065 | Canola | plastid | 18.15 | 33.33 |
| CDY38740 | Canola | plastid | 30.89 | 33.06 |
| Bra029050.1-P | Field mustard | plastid | 30.5 | 32.11 |
| CDY43064 | Canola | plastid | 30.5 | 32.11 |
| CDY70179 | Canola | plastid | 29.34 | 30.89 |
| TraesCS7A01G225900.1 | Wheat | mitochondrion | 31.66 | 30.83 |
| CDY70180 | Canola | plastid | 30.5 | 30.5 |
| Bra029051.1-P | Field mustard | plastid | 29.34 | 29.01 |
| CDY43065 | Canola | plastid | 29.34 | 29.01 |
| TraesCS2A01G514500.1 | Wheat | mitochondrion | 20.85 | 24.0 |
| TraesCS5A01G358200.1 | Wheat | mitochondrion | 22.01 | 21.27 |
| Bra029082.1-P | Field mustard | plastid | 13.13 | 20.73 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G059200.1 | EnsemblPlantsGene:TraesCS3A01G059200 | Gene3D:3.10.280.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 | InterPro:MAM33_sf |
| PANTHER:PTHR10826 | PANTHER:PTHR10826:SF12 | PFAM:PF02330 | SEG:seg | SUPFAM:SSF54529 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3A:+:35761051..35763657
Molecular Weight (calculated)
28978.9 Da
IEP (calculated)
4.365
GRAVY (calculated)
-0.571
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MALFAAARRA ASSSLPLIRA SASASRGAAS RGAALLRPLA AAAARPMPFS SATALKPSSD DELLRIVKAE IKFAEDCDDH DRVEEIPDSF PFKITDNKGL
101: NDITLTRTYQ GEKIEVLVSM PNLVTGDEPE HDQDEDDKEK DDDQDDGEKP PKSSLPLTVT ITKSDGPSLE FTCTAYPDEI LIDTLSVKQP SEKLEEDYIA
201: YEGPDFNDLD ENLQRAFHKY LELRGITPMT TNFLHEYMIN KDSREYLFWL NKLKDFVKQ
101: NDITLTRTYQ GEKIEVLVSM PNLVTGDEPE HDQDEDDKEK DDDQDDGEKP PKSSLPLTVT ITKSDGPSLE FTCTAYPDEI LIDTLSVKQP SEKLEEDYIA
201: YEGPDFNDLD ENLQRAFHKY LELRGITPMT TNFLHEYMIN KDSREYLFWL NKLKDFVKQ
001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY
Arabidopsis Description
AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.