Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G02050.1 | CDX89437 | AT4G25200.1 | 21798944 |
| AT5G02050.1 | CDY03368 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43065 | Canola | plastid | 95.75 | 94.66 |
| CDY70179 | Canola | plastid | 66.8 | 70.33 |
| CDY43064 | Canola | plastid | 66.41 | 69.92 |
| CDY47065 | Canola | plastid | 35.52 | 65.25 |
| CDY38740 | Canola | plastid | 57.14 | 61.16 |
| CDY47064 | Canola | plastid | 57.53 | 60.57 |
| CDY38743 | Canola | cytosol | 33.2 | 56.21 |
| CDX80800 | Canola | mitochondrion | 48.65 | 48.65 |
| CDY55117 | Canola | mitochondrion, plastid | 47.88 | 47.88 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 47.49 | 46.07 |
| KRH00042 | Soybean | nucleus | 36.68 | 37.4 |
| KRH49169 | Soybean | endoplasmic reticulum | 35.91 | 36.76 |
| HORVU0Hr1G006190.1 | Barley | cytosol | 25.1 | 36.52 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 32.82 | 32.32 |
| Os01t0143300-01 | Rice | mitochondrion | 32.05 | 31.44 |
| CDY20481 | Canola | mitochondrion | 29.73 | 31.05 |
| CDX98894 | Canola | mitochondrion | 30.89 | 31.01 |
| CDX70103 | Canola | mitochondrion | 30.5 | 30.98 |
| CDY65769 | Canola | mitochondrion, plastid | 30.89 | 30.89 |
| CDX76083 | Canola | mitochondrion | 30.89 | 30.77 |
| HORVU3Hr1G011460.1 | Barley | mitochondrion | 30.12 | 30.71 |
| TraesCS3A01G059200.1 | Wheat | mitochondrion | 30.5 | 30.5 |
| TraesCS3B01G071700.1 | Wheat | mitochondrion | 30.5 | 30.5 |
| CDX74831 | Canola | mitochondrion | 28.96 | 30.12 |
| HORVU3Hr1G011490.1 | Barley | cytosol | 15.06 | 29.32 |
| Zm00001d039883_P001 | Maize | mitochondrion | 27.8 | 28.46 |
| EES00334 | Sorghum | mitochondrion, plastid | 28.96 | 28.2 |
| CDY11346 | Canola | mitochondrion | 28.19 | 27.97 |
| CDX68804 | Canola | cytosol | 12.36 | 26.89 |
| Solyc09g011250.2.1 | Tomato | mitochondrion | 25.87 | 26.69 |
| PGSC0003DMT400022948 | Potato | mitochondrion | 25.87 | 26.69 |
| CDX80981 | Canola | mitochondrion | 26.64 | 26.64 |
| Os01t0143700-00 | Rice | mitochondrion | 26.25 | 26.25 |
| EES00333 | Sorghum | plastid | 27.41 | 26.1 |
| HORVU1Hr1G072660.2 | Barley | mitochondrion | 25.1 | 25.39 |
| TraesCS1D01G281100.1 | Wheat | mitochondrion | 23.94 | 24.6 |
| Zm00001d008610_P001 | Maize | plastid | 25.87 | 24.45 |
| CDY39948 | Canola | mitochondrion | 22.78 | 24.38 |
| CDX87337 | Canola | mitochondrion | 22.78 | 24.38 |
| TraesCS3A01G059600.1 | Wheat | plastid | 25.1 | 23.9 |
| Os01t0143800-01 | Rice | plastid | 25.1 | 23.64 |
| CDY35045 | Canola | mitochondrion | 22.01 | 23.55 |
| TraesCS1B01G291000.1 | Wheat | mitochondrion | 23.55 | 23.46 |
| CDY33373 | Canola | mitochondrion | 21.62 | 23.05 |
| TraesCS3D01G059900.1 | Wheat | plastid | 23.94 | 22.96 |
| TraesCS3B01G072200.1 | Wheat | plastid | 23.94 | 22.96 |
| CDY13466 | Canola | mitochondrion | 21.62 | 22.86 |
| HORVU3Hr1G011470.3 | Barley | mitochondrion, plastid | 24.71 | 22.86 |
| CDX72338 | Canola | plastid | 22.01 | 22.8 |
| EES19636 | Sorghum | mitochondrion | 22.39 | 22.66 |
| HORVU3Hr1G011560.1 | Barley | plastid | 25.1 | 22.57 |
| HORVU3Hr1G085260.1 | Barley | cytosol | 13.51 | 22.15 |
| TraesCS3D01G059800.1 | Wheat | mitochondrion | 25.1 | 22.11 |
| Os05t0456000-01 | Rice | mitochondrion | 21.62 | 21.71 |
| TraesCS3B01G072000.1 | Wheat | mitochondrion | 21.62 | 20.74 |
| TraesCS3D01G059600.1 | Wheat | mitochondrion | 23.17 | 20.69 |
| TraesCS3B01G071900.1 | Wheat | mitochondrion | 24.32 | 20.32 |
| TraesCS3D01G059500.1 | Wheat | mitochondrion | 24.32 | 20.32 |
| TraesCS3D01G059700.1 | Wheat | mitochondrion | 21.62 | 19.93 |
| HORVU3Hr1G011580.1 | Barley | mitochondrion | 10.04 | 15.85 |
| HORVU3Hr1G011510.1 | Barley | plastid | 23.55 | 15.06 |
Protein Annotations
| EnsemblPlants:CDY70180 | EnsemblPlantsGene:GSBRNA2T00097049001 | Gene3D:3.10.280.10 | GO:A0A078JUN9 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 |
| InterPro:MAM33_sf | PANTHER:PTHR10826 | PANTHER:PTHR10826:SF12 | PFAM:PF02330 | ProteinID:CDY70180 | ProteinID:CDY70180.1 |
| SUPFAM:SSF54529 | UniParc:UPI0004EE5E72 | UniProt:A0A078JUN9 | MapMan:35.1 | : | : |
Description
BnaC03g71600DBnaC03g71600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JUN9]
Coordinates
chrLK041380:+:2130..3235
Molecular Weight (calculated)
29006.7 Da
IEP (calculated)
4.498
GRAVY (calculated)
-0.177
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLFCGASST VATLPFRAVR PPLSLQTGAQ RVTLGGGSRQ FSRASSLISL STGSKLSAIT AQENLVSVLE SQIESAVVNE ETPDDGDKLP EGFPFRIIDT
101: PGERVFFLTR KFEDETILVE IDPTVPLDEG KKEEPNDPQA EVLIGISMVI NVSKHDYAPC LEFLANAYID EIVIDAIYVK QPQELSYPFL AKKIKKLWYP
201: YEGPDFVDLD ENLQKAFHRF LEIRGIKPNI TEFVADYLAN KDSRERLQLL KDVKTFVDM
101: PGERVFFLTR KFEDETILVE IDPTVPLDEG KKEEPNDPQA EVLIGISMVI NVSKHDYAPC LEFLANAYID EIVIDAIYVK QPQELSYPFL AKKIKKLWYP
201: YEGPDFVDLD ENLQKAFHRF LEIRGIKPNI TEFVADYLAN KDSRERLQLL KDVKTFVDM
001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
Arabidopsis Description
At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.