Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G291000.1 | Wheat | mitochondrion | 92.46 | 89.62 |
| HORVU1Hr1G072660.2 | Barley | mitochondrion | 83.73 | 82.42 |
| EES19636 | Sorghum | mitochondrion | 59.13 | 58.2 |
| Os05t0456000-01 | Rice | mitochondrion | 59.13 | 57.75 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 36.11 | 34.6 |
| KRH15056 | Soybean | mitochondrion | 33.33 | 33.2 |
| KRH73081 | Soybean | mitochondrion | 32.94 | 32.81 |
| VIT_13s0019g02350.t01 | Wine grape | mitochondrion | 31.75 | 31.62 |
| PGSC0003DMT400055876 | Potato | mitochondrion, plastid | 30.56 | 30.2 |
| Bra005705.1-P | Field mustard | mitochondrion, plastid | 30.95 | 30.12 |
| CDY55117 | Canola | mitochondrion, plastid | 30.95 | 30.12 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 31.75 | 29.96 |
| CDX70103 | Canola | mitochondrion | 30.16 | 29.8 |
| CDX80800 | Canola | mitochondrion | 30.16 | 29.34 |
| CDY11346 | Canola | mitochondrion | 30.16 | 29.12 |
| Bra009157.1-P | Field mustard | mitochondrion | 28.97 | 29.08 |
| Solyc03g079930.2.1 | Tomato | plastid | 29.76 | 29.07 |
| Bra005873.1-P | Field mustard | mitochondrion | 29.76 | 28.74 |
| CDX98894 | Canola | mitochondrion | 28.97 | 28.29 |
| CDX80981 | Canola | mitochondrion | 28.97 | 28.19 |
| AT2G39795.1 | Thale cress | mitochondrion | 27.78 | 28.0 |
| AT5G05990.1 | Thale cress | mitochondrion | 28.57 | 27.8 |
| Bra014733.1-P | Field mustard | mitochondrion | 28.57 | 27.8 |
| CDX76083 | Canola | mitochondrion | 28.57 | 27.69 |
| AT3G55605.1 | Thale cress | mitochondrion | 28.17 | 27.52 |
| Bra005013.1-P | Field mustard | mitochondrion | 26.98 | 27.42 |
| CDX74831 | Canola | mitochondrion | 26.98 | 27.31 |
| AT2G39790.1 | Thale cress | mitochondrion, plastid | 25.79 | 27.08 |
| CDY20481 | Canola | mitochondrion | 26.59 | 27.02 |
| KRH49169 | Soybean | endoplasmic reticulum | 26.98 | 26.88 |
| KRH00042 | Soybean | nucleus | 26.98 | 26.77 |
| Solyc09g011250.2.1 | Tomato | mitochondrion | 26.59 | 26.69 |
| CDY65769 | Canola | mitochondrion, plastid | 27.38 | 26.64 |
| PGSC0003DMT400022948 | Potato | mitochondrion | 26.19 | 26.29 |
| CDY70179 | Canola | plastid | 23.81 | 24.39 |
| CDY43064 | Canola | plastid | 23.81 | 24.39 |
| Bra029050.1-P | Field mustard | plastid | 23.81 | 24.39 |
| CDY70180 | Canola | plastid | 24.6 | 23.94 |
| TraesCS7D01G228600.1 | Wheat | mitochondrion | 24.6 | 23.66 |
| CDY43065 | Canola | plastid | 24.21 | 23.28 |
| Bra029051.1-P | Field mustard | plastid | 24.21 | 23.28 |
| TraesCS3D01G059900.1 | Wheat | plastid | 24.6 | 22.96 |
| CDY38743 | Canola | cytosol | 13.89 | 22.88 |
| CDY38740 | Canola | plastid | 21.83 | 22.73 |
| TraesCS3D01G059800.1 | Wheat | mitochondrion | 25.79 | 22.11 |
| CDY47065 | Canola | plastid | 12.3 | 21.99 |
| CDY47064 | Canola | plastid | 21.43 | 21.95 |
| TraesCS5D01G367500.2 | Wheat | mitochondrion | 20.63 | 21.94 |
| Bra029081.1-P | Field mustard | plastid | 19.84 | 21.83 |
| TraesCS3D01G059500.1 | Wheat | mitochondrion | 26.59 | 21.61 |
| TraesCS3D01G059600.1 | Wheat | mitochondrion | 24.6 | 21.38 |
| TraesCS2D01G516100.1 | Wheat | mitochondrion | 19.84 | 21.37 |
| TraesCS3D01G059700.1 | Wheat | mitochondrion | 23.81 | 21.35 |
| Bra029083.1-P | Field mustard | mitochondrion | 14.29 | 18.95 |
| Bra029082.1-P | Field mustard | plastid | 11.51 | 17.68 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G281100.1 | EnsemblPlantsGene:TraesCS1D01G281100 | Gene3D:3.10.280.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 | InterPro:MAM33_sf |
| PANTHER:PTHR10826 | PANTHER:PTHR10826:SF10 | PFAM:PF02330 | SEG:seg | SUPFAM:SSF54529 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1D:-:379459203..379460178
Molecular Weight (calculated)
27508.8 Da
IEP (calculated)
7.915
GRAVY (calculated)
-0.342
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIASALRRA PRAAAAARAL FVALGSPRSG RVGPPHPRAA PVAPLSSLSA PQPSAVADAQ LLRVITYEIS RAQLDCRNRN WAKELGEGFP FEIRDKEGTN
101: RITLTRTHQD EQIEVEVLLP SPVDGAAQDD GEREEDDQAE DGKKQGHAGG DVPNRYCIPL TVRIRKGAAA SCLEISCRSY PTGFVVERLE FESAGGTAFS
201: DIPGELPKAL HLYLGSRGIS THFTYFMHAY MITKECHEYL SWLRKLKGLV KG
101: RITLTRTHQD EQIEVEVLLP SPVDGAAQDD GEREEDDQAE DGKKQGHAGG DVPNRYCIPL TVRIRKGAAA SCLEISCRSY PTGFVVERLE FESAGGTAFS
201: DIPGELPKAL HLYLGSRGIS THFTYFMHAY MITKECHEYL SWLRKLKGLV KG
001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK
Arabidopsis Description
At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.