CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005873.1-P	Field mustard	mitochondrion	98.08	98.08
CDX70103	Canola	mitochondrion	86.97	89.02
CDX98894	Canola	mitochondrion	86.97	87.98
CDX80981	Canola	mitochondrion	85.82	86.49
AT5G05990.1	Thale cress	mitochondrion	78.93	79.54
HORVU0Hr1G006190.1	Barley	cytosol	37.16	54.49
HORVU3Hr1G011460.1	Barley	mitochondrion	45.98	47.24
TraesCS3A01G059200.1	Wheat	mitochondrion	45.98	46.33
VIT_13s0019g02350.t01	Wine grape	mitochondrion	44.83	46.25
TraesCS3B01G071700.1	Wheat	mitochondrion	45.59	45.95
Os01t0143300-01	Rice	mitochondrion	45.59	45.08
Zm00001d039883_P001	Maize	mitochondrion	43.68	45.06
Solyc03g079930.2.1	Tomato	plastid	44.06	44.57
EES00334	Sorghum	mitochondrion, plastid	44.83	43.98
GSMUA_Achr4P16890_001	Banana	mitochondrion	44.06	43.73
PGSC0003DMT400055876	Potato	mitochondrion, plastid	41.0	41.96
KRH73081	Soybean	mitochondrion	40.61	41.9
KRH15056	Soybean	mitochondrion	40.23	41.5
CDY20481	Canola	mitochondrion	38.7	40.73
CDX76083	Canola	mitochondrion	40.23	40.38
CDX74831	Canola	mitochondrion	38.31	40.16
CDY65769	Canola	mitochondrion, plastid	39.08	39.38
HORVU3Hr1G085260.1	Barley	cytosol	23.75	39.24
HORVU3Hr1G011490.1	Barley	cytosol	19.54	38.35
CDX80800	Canola	mitochondrion	35.25	35.52
CDY55117	Canola	mitochondrion, plastid	35.25	35.52
CDY38743	Canola	cytosol	20.31	34.64
Os01t0143700-00	Rice	mitochondrion	34.1	34.36
Os01t0143800-01	Rice	plastid	33.72	32.0
TraesCS1D01G281100.1	Wheat	mitochondrion	29.12	30.16
CDY47064	Canola	plastid	28.35	30.08
EES00333	Sorghum	plastid	31.03	29.78
HORVU1Hr1G072660.2	Barley	mitochondrion	29.12	29.69
Zm00001d008610_P001	Maize	plastid	31.03	29.56
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	31.42	29.29
TraesCS3A01G059600.1	Wheat	plastid	30.27	29.04
CDY38740	Canola	plastid	26.82	28.93
CDY70180	Canola	plastid	27.97	28.19
TraesCS3D01G059900.1	Wheat	plastid	29.12	28.15
TraesCS1B01G291000.1	Wheat	mitochondrion	27.97	28.08
TraesCS3B01G072200.1	Wheat	plastid	28.74	27.78
HORVU3Hr1G011560.1	Barley	plastid	30.27	27.43
EES19636	Sorghum	mitochondrion	26.82	27.34
TraesCS3B01G072000.1	Wheat	mitochondrion	27.97	27.04
CDX68804	Canola	cytosol	12.26	26.89
CDY43065	Canola	plastid	26.82	26.72
CDY33373	Canola	mitochondrion	24.52	26.34
CDY35045	Canola	mitochondrion	24.14	26.03
CDY43064	Canola	plastid	24.52	26.02
TraesCS3D01G059700.1	Wheat	mitochondrion	27.97	25.98
Os05t0456000-01	Rice	mitochondrion	25.67	25.97
CDY39948	Canola	mitochondrion	23.75	25.62
CDY47065	Canola	plastid	13.79	25.53
CDX87337	Canola	mitochondrion	23.37	25.21
CDY70179	Canola	plastid	23.75	25.2
TraesCS3D01G059800.1	Wheat	mitochondrion	28.35	25.17
TraesCS3B01G071900.1	Wheat	mitochondrion	28.35	23.87
TraesCS3D01G059500.1	Wheat	mitochondrion	27.2	22.9
TraesCS3D01G059600.1	Wheat	mitochondrion	25.29	22.76
CDY13466	Canola	mitochondrion	21.07	22.45
CDX72338	Canola	plastid	21.07	22.0
HORVU3Hr1G011580.1	Barley	mitochondrion	11.88	18.9
HORVU3Hr1G011510.1	Barley	plastid	24.9	16.05

Protein Annotations

EnsemblPlants:CDY11346	EnsemblPlantsGene:GSBRNA2T00049392001	Gene3D:3.10.280.10	GO:A0A078FDE5	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	ProteinID:CDY11346	ProteinID:CDY11346.1
SEG:seg	SUPFAM:SSF54529	UniParc:UPI0004EDB75F	UniProt:A0A078FDE5	MapMan:35.1	:

Description

BnaA03g01820DBnaA03g01820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDE5]

Coordinates

chrLK032010:-:848816..849773

Molecular Weight (calculated)

29964.3 Da

IEP (calculated)

5.044

GRAVY (calculated)

-0.742

Length

261 amino acids

Sequence
(BLAST)

001: MATLLRRTAS RLVGSCIKNR FSVNPFYNQT TCAPHGRLRQ LTPSISRNNH FTTSARKRAS SNDPLLRVIE AEIGFAEQAD DYNRVEETPS GFPFKMEDKP
101: GTKIVSLTRD YQGESVEVEV HMTNLVTGDK GDDEEEEESD EEEEEDEDKP EKPKQSNVPL LVTLSKETGP SLEFRCTAFP DKIVIKDMWV TFPDDPSKDE
201: LAYEGPSFRV LDEKLRKAFH RYIEIRGITP GMINFLHEYM INKDSKEHLL WLKTLKNFVK S

Best Arabidopsis Sequence Match ( AT5G05990.1 )
(BLAST)

001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY

Arabidopsis Description

AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.