Factsheet for HORVU3Hr1G011470.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G011490.1	Barley	cytosol	46.43	97.74
HORVU3Hr1G011580.1	Barley	mitochondrion	48.57	82.93
TraesCS3D01G059800.1	Wheat	mitochondrion	80.0	76.19
HORVU0Hr1G006190.1	Barley	cytosol	29.64	46.63
HORVU3Hr1G011460.1	Barley	mitochondrion	34.64	38.19
Os01t0143300-01	Rice	mitochondrion	35.0	37.12
AT3G55605.1	Thale cress	mitochondrion	31.43	34.11
Bra014733.1-P	Field mustard	mitochondrion	31.43	33.98
EES00334	Sorghum	mitochondrion, plastid	32.14	33.83
CDX70103	Canola	mitochondrion	30.71	33.73
Zm00001d039883_P001	Maize	mitochondrion	30.36	33.6
Bra009157.1-P	Field mustard	mitochondrion	30.0	33.47
PGSC0003DMT400055876	Potato	mitochondrion, plastid	30.36	33.33
CDY65769	Canola	mitochondrion, plastid	30.71	33.2
VIT_13s0019g02350.t01	Wine grape	mitochondrion	30.0	33.2
CDX76083	Canola	mitochondrion	30.71	33.08
CDX98894	Canola	mitochondrion	30.36	32.95
Solyc03g079930.2.1	Tomato	plastid	30.36	32.95
HORVU3Hr1G085260.1	Barley	cytosol	18.57	32.91
KRH49169	Soybean	endoplasmic reticulum	29.64	32.81
KRH00042	Soybean	nucleus	29.64	32.68
Os01t0143700-00	Rice	mitochondrion	30.0	32.43
CDY20481	Canola	mitochondrion	28.57	32.26
Bra005013.1-P	Field mustard	mitochondrion	28.57	32.26
CDX74831	Canola	mitochondrion	28.57	32.13
CDY38743	Canola	cytosol	17.5	32.03
GSMUA_Achr4P16890_001	Banana	mitochondrion	30.0	31.94
AT2G39795.1	Thale cress	mitochondrion	28.21	31.6
Bra005873.1-P	Field mustard	mitochondrion	29.29	31.42
CDY11346	Canola	mitochondrion	29.29	31.42
AT5G05990.1	Thale cress	mitochondrion	28.93	31.27
CDX80981	Canola	mitochondrion	28.93	31.27
KRH15056	Soybean	mitochondrion	26.07	28.85
PGSC0003DMT400022948	Potato	mitochondrion	25.71	28.69
AT2G39790.1	Thale cress	mitochondrion, plastid	24.29	28.33
HORVU7Hr1G046980.1	Barley	mitochondrion	26.43	28.24
KRH73081	Soybean	mitochondrion	25.36	28.06
CDY55117	Canola	mitochondrion, plastid	25.71	27.8
Bra005705.1-P	Field mustard	mitochondrion, plastid	25.71	27.8
CDX80800	Canola	mitochondrion	25.71	27.8
AT5G02050.1	Thale cress	mitochondrion, plastid	26.43	27.72
Solyc09g011250.2.1	Tomato	mitochondrion	24.64	27.49
Bra029081.1-P	Field mustard	plastid	21.79	26.64
Bra029083.1-P	Field mustard	mitochondrion	17.86	26.32
CDY47064	Canola	plastid	21.79	24.8
CDY38740	Canola	plastid	21.43	24.79
CDY70180	Canola	plastid	22.86	24.71
HORVU3Hr1G011560.1	Barley	plastid	25.36	24.65
CDY43064	Canola	plastid	21.43	24.39
Bra029050.1-P	Field mustard	plastid	21.43	24.39
Bra029051.1-P	Field mustard	plastid	22.5	24.05
CDY43065	Canola	plastid	22.5	24.05
HORVU1Hr1G072660.2	Barley	mitochondrion	21.79	23.83
CDY70179	Canola	plastid	20.36	23.17
CDY47065	Canola	plastid	10.71	21.28
HORVU3Hr1G011510.1	Barley	plastid	29.29	20.25
HORVU2Hr1G113990.2	Barley	plastid	10.0	15.05
Bra029082.1-P	Field mustard	plastid	8.57	14.63
HORVU5Hr1G088460.2	Barley	mitochondrion	13.21	13.45

Protein Annotations

EnsemblPlants:HORVU3Hr1G011470.3	EnsemblPlantsGene:HORVU3Hr1G011470	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf
PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SUPFAM:SSF54529	UniParc:UPI000B463372	UniProt:A0A287K3P9
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:24782401..24786462

Molecular Weight (calculated)

31487.4 Da

IEP (calculated)

6.445

GRAVY (calculated)

-0.548

Length

280 amino acids

Sequence
(BLAST)

001: ALVRPTAAAA ILRHTPAGAR FSSATDYRPF VRGIRKGSEF LRAEKEQSSR PSAAELRAKA DSLRAATHDG EIVGVLNSVI QSRRRDLVKG IPKDFPFEIS
101: RTDGIPHITL TRSLNGEQIE VLVSMPKLDQ DKDCDVGLQE DEAEISPEEY IIPVRVTVSK ADGSSLEFTC TANPDNIVIE TLFMRRNKSS GAEDAVASEG
201: KEHDLGLLDE EGPHFHELDK NLQEAFHQYL EVRGITPMTA KLLREHMMSE DSHLSPKEKS DHRRRHLLWL MKLWNFVKKD

Best Arabidopsis Sequence Match ( AT3G55605.1 )
(BLAST)

001: MGFALCIRRS ASTLASVCGR VARAQAVSAI VNRSSLVPKP SLLRPFVSRG FPYSTATEPL KSDQTLIQVI DSEIKDSFEA DDHDADEETI DSSDFPFKIE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE

Arabidopsis Description

At3g55605 [Source:UniProtKB/TrEMBL;Acc:Q8LCT2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.