Factsheet for Bra005013.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74831	Canola	mitochondrion	99.6	99.2
CDY20481	Canola	mitochondrion	94.35	94.35
AT2G39795.1	Thale cress	mitochondrion	77.42	76.8
Bra014733.1-P	Field mustard	mitochondrion	60.48	57.92
HORVU0Hr1G006190.1	Barley	cytosol	35.89	50.0
AT2G39790.1	Thale cress	mitochondrion, plastid	46.77	48.33
GSMUA_Achr4P16890_001	Banana	mitochondrion	47.18	44.49
Bra009157.1-P	Field mustard	mitochondrion	43.15	42.63
HORVU3Hr1G011460.1	Barley	mitochondrion	43.55	42.52
TraesCS3A01G059200.1	Wheat	mitochondrion	44.35	42.47
Os01t0143300-01	Rice	mitochondrion	44.76	42.05
EES00334	Sorghum	mitochondrion, plastid	44.76	41.73
TraesCS3B01G071700.1	Wheat	mitochondrion	43.55	41.7
Zm00001d039883_P001	Maize	mitochondrion	41.94	41.11
Bra005873.1-P	Field mustard	mitochondrion	41.13	39.08
HORVU3Hr1G085260.1	Barley	cytosol	24.19	37.97
Bra005705.1-P	Field mustard	mitochondrion, plastid	38.71	37.07
Os01t0143700-00	Rice	mitochondrion	37.1	35.52
HORVU3Hr1G011490.1	Barley	cytosol	17.34	32.33
Bra029081.1-P	Field mustard	plastid	29.44	31.88
TraesCS3A01G059600.1	Wheat	plastid	34.68	31.62
TraesCS3D01G059900.1	Wheat	plastid	34.27	31.48
Os01t0143800-01	Rice	plastid	34.68	31.27
EES00333	Sorghum	plastid	34.27	31.25
TraesCS3B01G072200.1	Wheat	plastid	33.87	31.11
Bra029083.1-P	Field mustard	mitochondrion	23.39	30.53
TraesCS3B01G072000.1	Wheat	mitochondrion	32.66	30.0
Zm00001d008610_P001	Maize	plastid	33.06	29.93
HORVU3Hr1G011560.1	Barley	plastid	34.68	29.86
Bra029050.1-P	Field mustard	plastid	29.03	29.27
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	32.26	28.57
EES19636	Sorghum	mitochondrion	29.44	28.52
Bra026096.1-P	Field mustard	mitochondrion	27.82	28.51
TraesCS3D01G059700.1	Wheat	mitochondrion	31.85	28.11
Bra029051.1-P	Field mustard	plastid	29.44	27.86
Bra035158.1-P	Field mustard	mitochondrion	27.02	27.69
Os05t0456000-01	Rice	mitochondrion	28.63	27.52
HORVU1Hr1G072660.2	Barley	mitochondrion	28.23	27.34
TraesCS3D01G059800.1	Wheat	mitochondrion	32.26	27.21
TraesCS1D01G281100.1	Wheat	mitochondrion	27.42	26.98
TraesCS3B01G071900.1	Wheat	mitochondrion	33.47	26.77
TraesCS3D01G059500.1	Wheat	mitochondrion	32.26	25.81
TraesCS1B01G291000.1	Wheat	mitochondrion	26.61	25.38
HORVU3Hr1G011580.1	Barley	mitochondrion	15.32	23.17
TraesCS3D01G059600.1	Wheat	mitochondrion	25.81	22.07
Bra029082.1-P	Field mustard	plastid	13.31	20.12
Bra023971.1-P	Field mustard	plastid	19.76	19.52
HORVU3Hr1G011510.1	Barley	plastid	29.44	18.02

Protein Annotations

EnsemblPlants:Bra005013.1	EnsemblPlants:Bra005013.1-P	EnsemblPlantsGene:Bra005013	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529
UniParc:UPI00025473DE	UniProt:M4CLC6	MapMan:35.1	:	:	:

Description

AT2G39795 (E=2e-093) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA05:-:2982254..2983807

Molecular Weight (calculated)

27896.9 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.446

Length

248 amino acids

Sequence
(BLAST)

001: MAFTWCVRRS ASRLASVYGN RMSRLRSISA VVSRPSLAPT SSPFRPFALY STAIDRMSSE QSLLRVIDSE INTALQIDDP DLDEETAPGS FPFKIEDNPG
101: HQTVTLTREY KGEHIKVVVS MPSLDGDEND DEDDDDDGHS NGSSIPLVVT VTKKSGLSLE FSCMAFPDEI AIDALSVSNQ GSTLEDKLAN EGPDFECLDE
201: NLKKTFYKYL EIRGVKASTT NFLHQYMMRK VKREYLLWLK NVKKFMEE

Best Arabidopsis Sequence Match ( AT2G39795.1 )
(BLAST)

001: MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ

Arabidopsis Description

Uncharacterized protein At2g39795, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W487]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.