Factsheet for Bra023971.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13466	Canola	mitochondrion	96.41	98.78
CDX68804	Canola	cytosol	39.04	82.35
AT4G31930.1	Thale cress	mitochondrion	76.1	81.62
KRH05267	Soybean	mitochondrion	47.41	50.85
PGSC0003DMT400067216	Potato	mitochondrion	47.81	50.85
Solyc06g065800.2.1	Tomato	mitochondrion	47.41	50.42
KRH15786	Soybean	mitochondrion	46.22	48.95
VIT_04s0008g05940.t01	Wine grape	mitochondrion	43.43	43.6
GSMUA_Achr5P22820_001	Banana	mitochondrion	35.86	39.65
GSMUA_Achr10P...	Banana	mitochondrion	33.86	39.53
Bra035158.1-P	Field mustard	mitochondrion	34.66	35.95
Os09t0557400-01	Rice	mitochondrion	31.08	34.82
TraesCS2B01G542100.1	Wheat	mitochondrion	29.88	33.78
KXG36169	Sorghum	mitochondrion	31.08	33.05
Os08t0439900-01	Rice	mitochondrion	30.68	33.05
EES15053	Sorghum	mitochondrion	30.28	32.9
TraesCS2A01G514500.1	Wheat	mitochondrion	29.48	32.89
Bra026096.1-P	Field mustard	mitochondrion	31.08	32.23
TraesCS5B01G360700.1	Wheat	mitochondrion	30.28	32.2
Zm00001d032163_P001	Maize	mitochondrion	28.69	31.3
TraesCS5D01G367500.2	Wheat	mitochondrion	29.48	31.22
TraesCS2D01G516100.1	Wheat	mitochondrion	29.08	31.2
TraesCS5A01G358200.1	Wheat	mitochondrion	30.28	28.36
Bra029081.1-P	Field mustard	plastid	21.12	23.14
Bra005705.1-P	Field mustard	mitochondrion, plastid	22.71	22.01
Bra009157.1-P	Field mustard	mitochondrion	21.91	21.91
Bra029051.1-P	Field mustard	plastid	22.71	21.76
Bra029083.1-P	Field mustard	mitochondrion	16.33	21.58
Bra005873.1-P	Field mustard	mitochondrion	21.91	21.07
Bra014733.1-P	Field mustard	mitochondrion	21.12	20.46
Bra029050.1-P	Field mustard	plastid	19.92	20.33
HORVU2Hr1G113990.2	Barley	plastid	14.74	19.89
Bra005013.1-P	Field mustard	mitochondrion	19.52	19.76
HORVU5Hr1G088460.2	Barley	mitochondrion	21.51	19.64
Bra029082.1-P	Field mustard	plastid	11.55	17.68

Protein Annotations

EnsemblPlants:Bra023971.1	EnsemblPlants:Bra023971.1-P	EnsemblPlantsGene:Bra023971	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF14	PFAM:PF02330	SUPFAM:SSF54529	UniParc:UPI0002540FDF
UniProt:M4E5B7	MapMan:35.2	:	:	:	:

Description

AT4G31930 (E=3e-103) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA03:-:28534079..28535176

Molecular Weight (calculated)

28678.6 Da

IEP (calculated)

8.593

GRAVY (calculated)

-0.314

Length

251 amino acids

Sequence
(BLAST)

001: MASTATMRTS MALLLRTLSS KARTFHPQSP SLSWARCYPL LPAPQSRDIT TSRRSYAAIA SAQSPFRSNL LRIIRNEIDY QSEYAPPHQP ATEFKSFSVE
101: DRPGEQCIVM KGKFGEDETI KMEATMFDGF MAVPRTGLDA SGSDVRLHVS LLVDISKADG SEDMEFLCSV WPNRIEIQNL YMLRRDKITG QPYMGPKFGS
201: LKYDFQTAIK EFLRVRGIDS ELCFFLHEYM MNKDRIELIQ WLSKLNSFIA K

Best Arabidopsis Sequence Match ( AT4G31930.1 )
(BLAST)

001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ

Arabidopsis Description

AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.