CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032163_P001	Maize	mitochondrion	90.04	90.43
TraesCS2B01G542100.1	Wheat	mitochondrion	65.37	68.02
TraesCS2A01G514500.1	Wheat	mitochondrion	65.8	67.56
Os08t0439900-01	Rice	mitochondrion	67.1	66.52
TraesCS2D01G516100.1	Wheat	mitochondrion	64.07	63.25
GSMUA_Achr5P22820_001	Banana	mitochondrion	49.35	50.22
HORVU2Hr1G113990.2	Barley	plastid	36.36	45.16
KXG36169	Sorghum	mitochondrion	41.13	40.25
CDX68804	Canola	cytosol	18.18	35.29
VIT_04s0008g05940.t01	Wine grape	mitochondrion	38.1	35.2
PGSC0003DMT400067216	Potato	mitochondrion	33.77	33.05
Solyc06g065800.2.1	Tomato	mitochondrion	33.33	32.63
KRH05267	Soybean	mitochondrion	32.9	32.48
AT4G31930.1	Thale cress	mitochondrion	31.6	31.2
CDY13466	Canola	mitochondrion	32.9	31.02
KRH15786	Soybean	mitochondrion	31.6	30.8
Bra023971.1-P	Field mustard	plastid	32.9	30.28
CDX72338	Canola	plastid	31.6	29.2
EER88336	Sorghum	mitochondrion	23.81	20.75
EES00334	Sorghum	mitochondrion, plastid	23.38	20.3
EES19636	Sorghum	mitochondrion	21.21	19.14
EES00333	Sorghum	plastid	22.51	19.12

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.2	EntrezGene:8080602	UniProt:C5YLB2	ProteinID:EES13907.1	EnsemblPlants:EES15053
ProteinID:EES15053	ProteinID:EES15053.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	ProteinID:OQU80529.1
ProteinID:OQU80530.1	ProteinID:OQU80531.1	ProteinID:OQU80532.1	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF16
EnsemblPlantsGene:SORBI_3007G140100	SUPFAM:SSF54529	UniParc:UPI0001A8795E	RefSeq:XP_002444412.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:56922795..56925142

Molecular Weight (calculated)

25848.8 Da

IEP (calculated)

6.369

GRAVY (calculated)

-0.424

Length

231 amino acids

Sequence
(BLAST)

001: MALARRLLRL SPHLGTLPLP SPNSSNLIGT RTYISDMRRS AFVDRLLRSV RSEISSLSNF APPPSPPPPT PFTVEDRPGE QWTRLRRVFP AAEGEEEEVR
101: VDATLVDGAL PASRSGADTG GPPRLHISVN VEVSKAARPG VVLTFECSAW PDEMEVRRVF PVRRGGPAPV QQYIGRQFSE LDEEMQSAVQ DYLEQIGVND
201: DLAAFLHAYM ENKEHTELIR WLKNIECHIK K

Best Arabidopsis Sequence Match ( AT1G15870.1 )
(BLAST)

001: MARLLRCLRR SFIFSSSTSI AYRNPRICVQ SNQSYIFLSS RKFLSSGSYV SEMRRTAFEG NILRLIRLEI QSELDHSPIL QPEESFGPFT VDERPGEQWI
101: SLRRKFGEKE DIKIEATMFD GSVPSSKSTT SDPEDVQLHI TFIVNISKGD GETLEIMCSA WPDTIQITKF FVRKSSQNSP NAYIGPEFQE MEDELQDSVY
201: RFLEERGISD DLAEFLHQYM KNKDKAEYIR WMETVKSYVE QK

Arabidopsis Description

At1g15870/F7H2_19 [Source:UniProtKB/TrEMBL;Acc:Q9LMP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.