CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023971.1-P	Field mustard	plastid	98.78	96.41
CDX72338	Canola	plastid	93.47	91.6
CDX68804	Canola	cytosol	40.0	82.35
AT4G31930.1	Thale cress	mitochondrion	77.96	81.62
KRH05267	Soybean	mitochondrion	48.16	50.43
PGSC0003DMT400067216	Potato	mitochondrion	48.57	50.42
Solyc06g065800.2.1	Tomato	mitochondrion	48.57	50.42
KRH15786	Soybean	mitochondrion	46.94	48.52
VIT_04s0008g05940.t01	Wine grape	mitochondrion	44.08	43.2
GSMUA_Achr5P22820_001	Banana	mitochondrion	36.73	39.65
GSMUA_Achr10P...	Banana	mitochondrion	34.29	39.07
CDX87337	Canola	mitochondrion	36.33	36.78
CDY39948	Canola	mitochondrion	35.1	35.54
Os09t0557400-01	Rice	mitochondrion	31.43	34.38
TraesCS2B01G542100.1	Wheat	mitochondrion	30.2	33.33
KXG36169	Sorghum	mitochondrion	31.84	33.05
EES15053	Sorghum	mitochondrion	31.02	32.9
Os08t0439900-01	Rice	mitochondrion	31.02	32.62
TraesCS2A01G514500.1	Wheat	mitochondrion	29.8	32.44
TraesCS5B01G360700.1	Wheat	mitochondrion	31.02	32.2
CDY33373	Canola	mitochondrion	31.84	32.1
CDY35045	Canola	mitochondrion	31.02	31.41
Zm00001d032163_P001	Maize	mitochondrion	29.39	31.3
TraesCS5D01G367500.2	Wheat	mitochondrion	30.2	31.22
TraesCS2D01G516100.1	Wheat	mitochondrion	29.39	30.77
TraesCS5A01G358200.1	Wheat	mitochondrion	31.02	28.36
CDY38743	Canola	cytosol	16.73	26.8
CDY47064	Canola	plastid	24.49	24.39
CDY38740	Canola	plastid	24.08	24.38
CDX80800	Canola	mitochondrion	23.67	22.39
CDX70103	Canola	mitochondrion	22.86	21.96
CDY55117	Canola	mitochondrion, plastid	22.86	21.62
CDY70180	Canola	plastid	22.86	21.62
CDY43065	Canola	plastid	22.86	21.37
CDX98894	Canola	mitochondrion	22.45	21.32
CDY47065	Canola	plastid	12.24	21.28
CDX80981	Canola	mitochondrion	22.45	21.24
CDY11346	Canola	mitochondrion	22.45	21.07
CDY65769	Canola	mitochondrion, plastid	21.63	20.46
CDX76083	Canola	mitochondrion	21.63	20.38
CDY20481	Canola	mitochondrion	20.41	20.16
CDY43064	Canola	plastid	20.0	19.92
HORVU2Hr1G113990.2	Barley	plastid	15.1	19.89
CDX74831	Canola	mitochondrion	20.0	19.68
HORVU5Hr1G088460.2	Barley	mitochondrion	22.04	19.64
CDY70179	Canola	plastid	19.59	19.51

Protein Annotations

EnsemblPlants:CDY13466	EnsemblPlantsGene:GSBRNA2T00077766001	Gene3D:3.10.280.10	GO:A0A078FJX9	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF14	PFAM:PF02330	ProteinID:CDY13466	ProteinID:CDY13466.1
SUPFAM:SSF54529	UniParc:UPI0004EEA086	UniProt:A0A078FJX9	MapMan:35.2	:	:

Description

BnaA03g51840DBnaA03g51840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJX9]

Coordinates

chrLK032035:-:505812..506940

Molecular Weight (calculated)

28140.9 Da

IEP (calculated)

8.311

GRAVY (calculated)

-0.343

Length

245 amino acids

Sequence
(BLAST)

001: MRTSMALLLR TLSSKARTFH PHSPSLSWAR CYPLLPAPQS RDITTSRRSY AAIASAQSPF RSNLLRIIRN EIDYQSEYAP PHQPATEFKS FSVEDRPGEQ
101: CIVMKGNFGE DETIKMEATM FDGFMTVPRT GLDASGSDVR LHVSLLVDIS KADGSEDMEF LCSVWPNRIE IQNLYMLRRD KITGQPYMGP KFGSLKYDFQ
201: TAIKEFLRVR GIDSELCFFL HEYMMNKDRI ELIQWLSKLN SFIAK

Best Arabidopsis Sequence Match ( AT4G31930.1 )
(BLAST)

001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ

Arabidopsis Description

AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.