CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89437
CDY03368

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	CDX89437	AT4G25200.1	21798944
AT5G02050.1	CDY03368	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029081.1-P	Field mustard	plastid	94.33	58.08
CDY38740	Canola	plastid	76.6	44.63
CDY47064	Canola	plastid	74.47	42.68
CDY43064	Canola	plastid	63.12	36.18
CDY38743	Canola	cytosol	39.01	35.95
CDY70179	Canola	plastid	62.41	35.77
CDY70180	Canola	plastid	65.25	35.52
CDY43065	Canola	plastid	64.54	34.73
CDX80800	Canola	mitochondrion	44.68	24.32
CDY55117	Canola	mitochondrion, plastid	44.68	24.32
AT5G02050.1	Thale cress	mitochondrion, plastid	43.26	22.85
KRH49169	Soybean	endoplasmic reticulum	36.88	20.55
KRH00042	Soybean	nucleus	36.88	20.47
GSMUA_Achr4P16890_001	Banana	mitochondrion	36.88	19.77
HORVU0Hr1G006190.1	Barley	cytosol	23.4	18.54
TraesCS3B01G071700.1	Wheat	mitochondrion	33.33	18.15
TraesCS3A01G059200.1	Wheat	mitochondrion	33.33	18.15
Os01t0143300-01	Rice	mitochondrion	33.33	17.8
HORVU3Hr1G011460.1	Barley	mitochondrion	31.91	17.72
EES00334	Sorghum	mitochondrion, plastid	31.21	16.54
HORVU3Hr1G011490.1	Barley	cytosol	15.6	16.54
CDY20481	Canola	mitochondrion	29.08	16.53
CDX74831	Canola	mitochondrion	29.08	16.47
CDY65769	Canola	mitochondrion, plastid	29.79	16.22
CDX76083	Canola	mitochondrion	29.79	16.15
Os01t0143700-00	Rice	mitochondrion	28.37	15.44
CDY39948	Canola	mitochondrion	26.24	15.29
CDY35045	Canola	mitochondrion	26.24	15.29
CDY33373	Canola	mitochondrion	26.24	15.23
CDX70103	Canola	mitochondrion	26.95	14.9
CDX87337	Canola	mitochondrion	25.53	14.88
CDX98894	Canola	mitochondrion	26.95	14.73
PGSC0003DMT400022948	Potato	mitochondrion	25.53	14.34
Zm00001d039883_P001	Maize	mitochondrion	25.53	14.23
Solyc09g011250.2.1	Tomato	mitochondrion	24.82	13.94
CDY11346	Canola	mitochondrion	25.53	13.79
HORVU1Hr1G072660.2	Barley	mitochondrion	24.82	13.67
CDX68804	Canola	cytosol	11.35	13.45
Os05t0456000-01	Rice	mitochondrion	24.11	13.18
CDX80981	Canola	mitochondrion	24.11	13.13
CDX72338	Canola	plastid	21.99	12.4
TraesCS1D01G281100.1	Wheat	mitochondrion	21.99	12.3
TraesCS3B01G071900.1	Wheat	mitochondrion	26.95	12.26
CDY13466	Canola	mitochondrion	21.28	12.24
TraesCS3D01G059500.1	Wheat	mitochondrion	25.53	11.61
TraesCS1B01G291000.1	Wheat	mitochondrion	21.28	11.54
HORVU3Hr1G011560.1	Barley	plastid	23.4	11.46
TraesCS3A01G059600.1	Wheat	plastid	21.99	11.4
EES00333	Sorghum	plastid	21.99	11.4
EES19636	Sorghum	mitochondrion	20.57	11.33
Zm00001d008610_P001	Maize	plastid	21.99	11.31
TraesCS3D01G059900.1	Wheat	plastid	21.28	11.11
TraesCS3B01G072200.1	Wheat	plastid	21.28	11.11
TraesCS3B01G072000.1	Wheat	mitochondrion	20.57	10.74
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	21.28	10.71
TraesCS3D01G059600.1	Wheat	mitochondrion	21.99	10.69
TraesCS3D01G059700.1	Wheat	mitochondrion	21.28	10.68
TraesCS3D01G059800.1	Wheat	mitochondrion	21.99	10.54
Os01t0143800-01	Rice	plastid	19.86	10.18
HORVU3Hr1G011510.1	Barley	plastid	25.53	8.89
HORVU3Hr1G011580.1	Barley	mitochondrion	7.09	6.1
HORVU3Hr1G085260.1	Barley	cytosol	1.42	1.27

Protein Annotations

EnsemblPlants:CDY47065	EnsemblPlantsGene:GSBRNA2T00086679001	Gene3D:3.10.280.10	GO:A0A078I842	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	ProteinID:CDY47065	ProteinID:CDY47065.1
SEG:seg	SUPFAM:SSF54529	UniParc:UPI0004EE1EC7	UniProt:A0A078I842	MapMan:35.2	:

Description

BnaA03g12330DBnaA03g12330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I842]

Coordinates

chrLK032696:-:30333..34259

Molecular Weight (calculated)

15806.6 Da

IEP (calculated)

4.900

GRAVY (calculated)

-0.134

Length

141 amino acids

Sequence
(BLAST)

001: MSLFCPVSVA TLPFRPARSP AASLQTGAQR VTFGRSHQFS RLISFSSTSA LTPSSNLVSL LESEIESSVI NEDAPDNDEF WGFLGFLCSD LDENLQKAFN
101: KFLEIRGINP TITDFLADYL ANKDKREHLR WLKDVKSFVD I

Best Arabidopsis Sequence Match ( AT5G02050.1 )
(BLAST)

001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK

Arabidopsis Description

At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.