Factsheet for HORVU3Hr1G011510.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G006190.1	Barley	cytosol	16.54	37.64
Os01t0143300-01	Rice	mitochondrion	23.46	35.98
HORVU3Hr1G011460.1	Barley	mitochondrion	22.22	35.43
Os01t0143700-00	Rice	mitochondrion	20.25	31.66
HORVU3Hr1G011580.1	Barley	mitochondrion	12.59	31.1
HORVU3Hr1G011490.1	Barley	cytosol	10.12	30.83
EES00334	Sorghum	mitochondrion, plastid	20.0	30.45
Zm00001d039883_P001	Maize	mitochondrion	19.01	30.43
GSMUA_Achr4P16890_001	Banana	mitochondrion	19.75	30.42
AT2G39795.1	Thale cress	mitochondrion	18.77	30.4
Bra005013.1-P	Field mustard	mitochondrion	18.02	29.44
CDX74831	Canola	mitochondrion	18.02	29.32
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	20.25	29.29
CDY20481	Canola	mitochondrion	17.53	28.63
AT3G55605.1	Thale cress	mitochondrion	18.02	28.29
Solyc03g079930.2.1	Tomato	plastid	17.78	27.91
HORVU3Hr1G085260.1	Barley	cytosol	10.86	27.85
CDX70103	Canola	mitochondrion	17.53	27.84
Bra009157.1-P	Field mustard	mitochondrion	17.04	27.49
HORVU3Hr1G011560.1	Barley	plastid	19.51	27.43
Bra014733.1-P	Field mustard	mitochondrion	17.53	27.41
CDX76083	Canola	mitochondrion	17.53	27.31
KRH73081	Soybean	mitochondrion	17.04	27.27
KRH00042	Soybean	nucleus	17.04	27.17
PGSC0003DMT400022948	Potato	mitochondrion	16.79	27.09
Solyc09g011250.2.1	Tomato	mitochondrion	16.79	27.09
PGSC0003DMT400055876	Potato	mitochondrion, plastid	17.04	27.06
KRH49169	Soybean	endoplasmic reticulum	16.79	26.88
KRH15056	Soybean	mitochondrion	16.79	26.88
VIT_13s0019g02350.t01	Wine grape	mitochondrion	16.79	26.88
CDX98894	Canola	mitochondrion	17.04	26.74
CDY65769	Canola	mitochondrion, plastid	17.04	26.64
AT5G05990.1	Thale cress	mitochondrion	16.79	26.25
AT2G39790.1	Thale cress	mitochondrion, plastid	15.56	26.25
Bra029081.1-P	Field mustard	plastid	14.81	26.2
HORVU1Hr1G072660.2	Barley	mitochondrion	16.54	26.17
CDY47065	Canola	plastid	8.89	25.53
CDY38743	Canola	cytosol	9.63	25.49
CDX80981	Canola	mitochondrion	16.3	25.48
Bra005873.1-P	Field mustard	mitochondrion	16.05	24.9
CDY11346	Canola	mitochondrion	16.05	24.9
HORVU7Hr1G046980.1	Barley	mitochondrion	16.05	24.81
AT5G02050.1	Thale cress	mitochondrion, plastid	16.3	24.72
CDX80800	Canola	mitochondrion	15.8	24.71
Bra029050.1-P	Field mustard	plastid	14.57	23.98
CDY43064	Canola	plastid	14.57	23.98
CDY55117	Canola	mitochondrion, plastid	15.31	23.94
Bra005705.1-P	Field mustard	mitochondrion, plastid	15.31	23.94
CDY43065	Canola	plastid	15.31	23.66
Bra029051.1-P	Field mustard	plastid	15.31	23.66
CDY70180	Canola	plastid	15.06	23.55
CDY70179	Canola	plastid	14.07	23.17
CDY38740	Canola	plastid	13.83	23.14
CDY47064	Canola	plastid	13.83	22.76
Bra029083.1-P	Field mustard	mitochondrion	9.63	20.53
Bra029082.1-P	Field mustard	plastid	7.65	18.9
HORVU2Hr1G113990.2	Barley	plastid	5.93	12.9
HORVU5Hr1G088460.2	Barley	mitochondrion	7.9	11.64

Protein Annotations

EnsemblPlants:HORVU3Hr1G011510.1	EnsemblPlantsGene:HORVU3Hr1G011510	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf
PANTHER:PTHR10826	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529	UniParc:UPI000B46AF00	UniProt:A0A287K3K2
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:24866757..24870129

Molecular Weight (calculated)

43471.2 Da

IEP (calculated)

6.251

GRAVY (calculated)

-0.207

Length

405 amino acids

Sequence
(BLAST)

001: ARGPPPHFSP SPRSPPAPAI RNPSPPPPPP TAMSLFAAAR RGAMGLISGA RHASAPSSSV IHAAASLDAA HAHARRAWSD VFARATPSIG AAEAEIRAAQ
101: YFYELAAPSL ARASASGASR EGINLAVRAA TSDLIEGSSS VLRASSMLRG ATSNNLREAA SNYFDAAAYM LRASETPGDN AICHFRASAL SIGAAEAAFR
201: AALVALSSDY PSPNSSGDDT DLIRIINTEL ESALKSDDHR KVDVILTDFP FKMCEKGCAG LTFTRTFHNE EIEVLVSVPD HYMSDTENEN EKGENSPKAT
301: FALTVTVSKG NALSMFTCTA YPSEIGVNTL YMRLTAGEDE QEEYTLSFEG PESIQSLQML SQKYLELRGV SFMNSIFLDQ LMRNKGVVDR IFWLGKLKEF
401: VRPSK

Best Arabidopsis Sequence Match ( AT3G55605.1 )
(BLAST)

001: MGFALCIRRS ASTLASVCGR VARAQAVSAI VNRSSLVPKP SLLRPFVSRG FPYSTATEPL KSDQTLIQVI DSEIKDSFEA DDHDADEETI DSSDFPFKIE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE

Arabidopsis Description

At3g55605 [Source:UniProtKB/TrEMBL;Acc:Q8LCT2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.