Factsheet for Bra029051.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013872.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	Bra013872.1-P	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43065	Canola	plastid	99.62	99.62
Bra029050.1-P	Field mustard	plastid	66.41	70.73
Bra029081.1-P	Field mustard	plastid	53.05	60.7
Bra029082.1-P	Field mustard	plastid	34.35	54.88
Bra005705.1-P	Field mustard	mitochondrion, plastid	45.04	45.56
AT5G02050.1	Thale cress	mitochondrion, plastid	44.66	43.82
Bra029083.1-P	Field mustard	mitochondrion	29.39	40.53
KRH00042	Soybean	nucleus	35.11	36.22
KRH49169	Soybean	endoplasmic reticulum	34.35	35.57
HORVU0Hr1G006190.1	Barley	cytosol	23.66	34.83
GSMUA_Achr4P16890_001	Banana	mitochondrion	32.06	31.94
Os01t0143300-01	Rice	mitochondrion	30.92	30.68
Bra014733.1-P	Field mustard	mitochondrion	30.15	30.5
HORVU3Hr1G011460.1	Barley	mitochondrion	28.63	29.53
Bra009157.1-P	Field mustard	mitochondrion	28.24	29.48
Bra005013.1-P	Field mustard	mitochondrion	27.86	29.44
TraesCS3A01G059200.1	Wheat	mitochondrion	29.01	29.34
TraesCS3B01G071700.1	Wheat	mitochondrion	29.01	29.34
HORVU3Hr1G011490.1	Barley	cytosol	14.5	28.57
Zm00001d039883_P001	Maize	mitochondrion	26.72	27.67
EES00334	Sorghum	mitochondrion, plastid	27.86	27.44
Bra005873.1-P	Field mustard	mitochondrion	27.1	27.2
Solyc09g011250.2.1	Tomato	mitochondrion	24.81	25.9
PGSC0003DMT400022948	Potato	mitochondrion	24.81	25.9
Os01t0143700-00	Rice	mitochondrion	25.57	25.87
EES00333	Sorghum	plastid	26.72	25.74
Bra035158.1-P	Field mustard	mitochondrion	23.66	25.62
HORVU1Hr1G072660.2	Barley	mitochondrion	24.81	25.39
Bra026096.1-P	Field mustard	mitochondrion	22.9	24.79
TraesCS1D01G281100.1	Wheat	mitochondrion	23.28	24.21
Zm00001d008610_P001	Maize	plastid	25.19	24.09
TraesCS3A01G059600.1	Wheat	plastid	24.43	23.53
Os01t0143800-01	Rice	plastid	24.43	23.27
TraesCS1B01G291000.1	Wheat	mitochondrion	22.9	23.08
Bra023971.1-P	Field mustard	plastid	21.76	22.71
EES19636	Sorghum	mitochondrion	22.14	22.66
TraesCS3B01G072200.1	Wheat	plastid	23.28	22.59
TraesCS3D01G059900.1	Wheat	plastid	23.28	22.59
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	24.05	22.5
HORVU3Hr1G011560.1	Barley	plastid	24.43	22.22
Os05t0456000-01	Rice	mitochondrion	21.37	21.71
TraesCS3D01G059800.1	Wheat	mitochondrion	24.05	21.43
TraesCS3D01G059600.1	Wheat	mitochondrion	23.28	21.03
HORVU3Hr1G085260.1	Barley	cytosol	12.6	20.89
TraesCS3B01G072000.1	Wheat	mitochondrion	21.37	20.74
TraesCS3B01G071900.1	Wheat	mitochondrion	24.05	20.32
TraesCS3D01G059500.1	Wheat	mitochondrion	24.05	20.32
TraesCS3D01G059700.1	Wheat	mitochondrion	21.37	19.93
HORVU3Hr1G011580.1	Barley	mitochondrion	9.92	15.85
HORVU3Hr1G011510.1	Barley	plastid	23.66	15.31

Protein Annotations

EnsemblPlants:Bra029051.1	EnsemblPlants:Bra029051.1-P	EnsemblPlantsGene:Bra029051	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SUPFAM:SSF54529	UniParc:UPI000253FF6B
UniProt:M4EJT5	MapMan:35.1	:	:	:	:

Description

AT5G02050 (E=9e-049) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA03:+:6056510..6057614

Molecular Weight (calculated)

29536.1 Da

IEP (calculated)

4.523

GRAVY (calculated)

-0.256

Length

262 amino acids

Sequence
(BLAST)

001: MSLFCGASST VATLPFRAVR PPLSLQTGAQ RVTLGGGSPQ FSRASSLISL SRGSKLSAIT AQENLVSVLE SQIESAVVNE ETPDDGEEED KLPEGFPFRI
101: IDTPGERVFF LTRKFENETI LVEIDPSAPF DEGKKEEPND PQAEVLIGIS MVINVSKHDY APCLEFLANA YIDEIVIHAI YVRQPQELSY PFLAKKIKKF
201: WYPYEGPDFV DLDENLQKAF HRFLEIRGIK PNITEFVTDY LANKDRREQL QLLKDVKTFV DM

Best Arabidopsis Sequence Match ( AT5G02050.1 )
(BLAST)

001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK

Arabidopsis Description

At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.